Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 AC007967.2-201ENST00000432613 625 ntBASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 SIGLEC30P-201ENST00000455569 941 ntBASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 AC136632.2-201ENST00000512891 861 ntBASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 IGHV3-52-201ENST00000519770 353 ntBASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 AL589182.2-201ENST00000619332 1049 ntBASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 PGM5P2-202ENST00000637225 1043 ntBASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
NPIPA3F8WFD2 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA3F8WFD2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA3F8WFD2 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA3F8WFD2 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA3F8WFD2 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA3F8WFD2 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA3F8WFD2 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA3F8WFD2 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA3F8WFD2 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA3F8WFD2 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA3F8WFD2 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.75■□□□□ 0.11
NPIPA3F8WFD2 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
NPIPA3F8WFD2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
NPIPA3F8WFD2 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA3F8WFD2 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA3F8WFD2 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.75■□□□□ 0.11
NPIPA3F8WFD2 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.75■□□□□ 0.11
NPIPA3F8WFD2 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.75■□□□□ 0.11
NPIPA3F8WFD2 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.75■□□□□ 0.11
NPIPA3F8WFD2 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.75■□□□□ 0.11
NPIPA3F8WFD2 KRT18P27-201ENST00000427733 1299 ntBASIC15.75■□□□□ 0.11
NPIPA3F8WFD2 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA3F8WFD2 AC009947.1-201ENST00000444350 727 ntBASIC15.75■□□□□ 0.11
NPIPA3F8WFD2 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
NPIPA3F8WFD2 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.75■□□□□ 0.11
NPIPA3F8WFD2 PGAM5P1-201ENST00000518923 814 ntBASIC15.75■□□□□ 0.11
NPIPA3F8WFD2 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.75■□□□□ 0.11
NPIPA3F8WFD2 AC019129.2-201ENST00000609837 1235 ntBASIC15.75■□□□□ 0.11
NPIPA3F8WFD2 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.75■□□□□ 0.11
NPIPA3F8WFD2 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA3F8WFD2 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA3F8WFD2 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA3F8WFD2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA3F8WFD2 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
NPIPA3F8WFD2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA3F8WFD2 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA3F8WFD2 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.74■□□□□ 0.11
NPIPA3F8WFD2 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA3F8WFD2 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
NPIPA3F8WFD2 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA3F8WFD2 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA3F8WFD2 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
NPIPA3F8WFD2 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.74■□□□□ 0.11
NPIPA3F8WFD2 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA3F8WFD2 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA3F8WFD2 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA3F8WFD2 AC133963.1-201ENST00000504166 1679 ntBASIC15.74■□□□□ 0.11
NPIPA3F8WFD2 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA3F8WFD2 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA3F8WFD2 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA3F8WFD2 AC073621.1-201ENST00000392730 636 ntBASIC15.74■□□□□ 0.11
NPIPA3F8WFD2 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.74■□□□□ 0.11
NPIPA3F8WFD2 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA3F8WFD2 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.74■□□□□ 0.11
NPIPA3F8WFD2 STK19B-204ENST00000512515 211 ntBASIC15.74■□□□□ 0.11
NPIPA3F8WFD2 RNA5SP416-201ENST00000516838 111 ntBASIC15.74■□□□□ 0.11
NPIPA3F8WFD2 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.74■□□□□ 0.11
NPIPA3F8WFD2 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.74■□□□□ 0.11
NPIPA3F8WFD2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.74■□□□□ 0.11
NPIPA3F8WFD2 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.74■□□□□ 0.11
NPIPA3F8WFD2 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA3F8WFD2 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA3F8WFD2 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA3F8WFD2 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
NPIPA3F8WFD2 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
NPIPA3F8WFD2 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA3F8WFD2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
NPIPA3F8WFD2 FZD10-202ENST00000539839 3282 ntBASIC15.74■□□□□ 0.11
NPIPA3F8WFD2 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms