Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 PI4KAP1-204ENST00000612579 1703 ntBASIC17.98■□□□□ 0.47
YJEFN3A6XGL0 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
YJEFN3A6XGL0 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.98■□□□□ 0.47
YJEFN3A6XGL0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.98■□□□□ 0.47
YJEFN3A6XGL0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
YJEFN3A6XGL0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.98■□□□□ 0.47
YJEFN3A6XGL0 AC034105.1-201ENST00000563488 319 ntBASIC17.98■□□□□ 0.47
YJEFN3A6XGL0 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.98■□□□□ 0.47
YJEFN3A6XGL0 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.98■□□□□ 0.47
YJEFN3A6XGL0 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
YJEFN3A6XGL0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.98■□□□□ 0.47
YJEFN3A6XGL0 Z83851.2-201ENST00000609564 659 ntBASIC17.98■□□□□ 0.47
YJEFN3A6XGL0 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.98■□□□□ 0.47
YJEFN3A6XGL0 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
YJEFN3A6XGL0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
YJEFN3A6XGL0 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
YJEFN3A6XGL0 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
YJEFN3A6XGL0 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
YJEFN3A6XGL0 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
YJEFN3A6XGL0 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.98■□□□□ 0.47
YJEFN3A6XGL0 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
YJEFN3A6XGL0 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
YJEFN3A6XGL0 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
YJEFN3A6XGL0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
YJEFN3A6XGL0 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
YJEFN3A6XGL0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
YJEFN3A6XGL0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
YJEFN3A6XGL0 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
YJEFN3A6XGL0 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
YJEFN3A6XGL0 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.98■□□□□ 0.47
YJEFN3A6XGL0 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
YJEFN3A6XGL0 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
YJEFN3A6XGL0 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
YJEFN3A6XGL0 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
YJEFN3A6XGL0 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
YJEFN3A6XGL0 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
YJEFN3A6XGL0 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
YJEFN3A6XGL0 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
YJEFN3A6XGL0 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
YJEFN3A6XGL0 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
YJEFN3A6XGL0 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
YJEFN3A6XGL0 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.97■□□□□ 0.47
YJEFN3A6XGL0 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
YJEFN3A6XGL0 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.97■□□□□ 0.47
YJEFN3A6XGL0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
YJEFN3A6XGL0 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
YJEFN3A6XGL0 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.97■□□□□ 0.47
YJEFN3A6XGL0 AC108073.2-201ENST00000464002 357 ntBASIC17.97■□□□□ 0.47
YJEFN3A6XGL0 AC108751.1-201ENST00000490852 363 ntBASIC17.97■□□□□ 0.47
YJEFN3A6XGL0 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
YJEFN3A6XGL0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.97■□□□□ 0.47
YJEFN3A6XGL0 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
YJEFN3A6XGL0 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.97■□□□□ 0.47
YJEFN3A6XGL0 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.97■□□□□ 0.47
YJEFN3A6XGL0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
YJEFN3A6XGL0 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
YJEFN3A6XGL0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
YJEFN3A6XGL0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
YJEFN3A6XGL0 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
YJEFN3A6XGL0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
YJEFN3A6XGL0 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.96■□□□□ 0.47
YJEFN3A6XGL0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.96■□□□□ 0.47
YJEFN3A6XGL0 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.96■□□□□ 0.47
YJEFN3A6XGL0 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
YJEFN3A6XGL0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.96■□□□□ 0.47
YJEFN3A6XGL0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
YJEFN3A6XGL0 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
YJEFN3A6XGL0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
YJEFN3A6XGL0 PAWRP1-201ENST00000451083 565 ntBASIC17.96■□□□□ 0.47
YJEFN3A6XGL0 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.96■□□□□ 0.47
YJEFN3A6XGL0 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.96■□□□□ 0.47
YJEFN3A6XGL0 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.96■□□□□ 0.47
YJEFN3A6XGL0 AC106730.1-201ENST00000566722 1090 ntBASIC17.96■□□□□ 0.47
YJEFN3A6XGL0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
YJEFN3A6XGL0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.96■□□□□ 0.47
YJEFN3A6XGL0 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.96■□□□□ 0.47
YJEFN3A6XGL0 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
YJEFN3A6XGL0 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
YJEFN3A6XGL0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
YJEFN3A6XGL0 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
YJEFN3A6XGL0 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
YJEFN3A6XGL0 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.96■□□□□ 0.46
YJEFN3A6XGL0 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
YJEFN3A6XGL0 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
YJEFN3A6XGL0 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
YJEFN3A6XGL0 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
YJEFN3A6XGL0 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
YJEFN3A6XGL0 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
YJEFN3A6XGL0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
YJEFN3A6XGL0 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
YJEFN3A6XGL0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
YJEFN3A6XGL0 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
YJEFN3A6XGL0 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
YJEFN3A6XGL0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
YJEFN3A6XGL0 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.95■□□□□ 0.46
YJEFN3A6XGL0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
YJEFN3A6XGL0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
YJEFN3A6XGL0 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
YJEFN3A6XGL0 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
YJEFN3A6XGL0 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms