Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRIT2A6NDA9 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRIT2A6NDA9 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
LRIT2A6NDA9 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRIT2A6NDA9 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRIT2A6NDA9 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRIT2A6NDA9 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRIT2A6NDA9 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRIT2A6NDA9 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.41■□□□□ 0.22
LRIT2A6NDA9 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LRIT2A6NDA9 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRIT2A6NDA9 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LRIT2A6NDA9 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRIT2A6NDA9 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRIT2A6NDA9 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.41■□□□□ 0.22
LRIT2A6NDA9 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.41■□□□□ 0.22
LRIT2A6NDA9 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.41■□□□□ 0.22
LRIT2A6NDA9 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRIT2A6NDA9 AC073648.2-201ENST00000510116 352 ntBASIC16.41■□□□□ 0.22
LRIT2A6NDA9 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LRIT2A6NDA9 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.41■□□□□ 0.22
LRIT2A6NDA9 AC104692.2-201ENST00000603054 253 ntBASIC16.41■□□□□ 0.22
LRIT2A6NDA9 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.41■□□□□ 0.22
LRIT2A6NDA9 AL031008.1-201ENST00000619963 541 ntBASIC16.41■□□□□ 0.22
LRIT2A6NDA9 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRIT2A6NDA9 AC080080.1-201ENST00000625121 2420 ntBASIC16.41■□□□□ 0.22
LRIT2A6NDA9 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
LRIT2A6NDA9 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRIT2A6NDA9 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRIT2A6NDA9 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRIT2A6NDA9 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.41■□□□□ 0.22
LRIT2A6NDA9 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LRIT2A6NDA9 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.41■□□□□ 0.22
LRIT2A6NDA9 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
LRIT2A6NDA9 GPR89P-201ENST00000407924 1495 ntBASIC16.41■□□□□ 0.22
LRIT2A6NDA9 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRIT2A6NDA9 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
LRIT2A6NDA9 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRIT2A6NDA9 AC092053.1-201ENST00000605787 1936 ntBASIC16.41■□□□□ 0.22
LRIT2A6NDA9 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.41■□□□□ 0.22
LRIT2A6NDA9 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRIT2A6NDA9 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRIT2A6NDA9 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT2A6NDA9 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT2A6NDA9 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.4■□□□□ 0.22
LRIT2A6NDA9 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT2A6NDA9 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT2A6NDA9 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT2A6NDA9 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT2A6NDA9 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.4■□□□□ 0.22
LRIT2A6NDA9 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
LRIT2A6NDA9 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT2A6NDA9 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT2A6NDA9 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LRIT2A6NDA9 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.4■□□□□ 0.22
LRIT2A6NDA9 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.4■□□□□ 0.22
LRIT2A6NDA9 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.4■□□□□ 0.22
LRIT2A6NDA9 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.4■□□□□ 0.22
LRIT2A6NDA9 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.4■□□□□ 0.22
LRIT2A6NDA9 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.4■□□□□ 0.22
LRIT2A6NDA9 AL139424.1-201ENST00000607572 797 ntBASIC16.4■□□□□ 0.22
LRIT2A6NDA9 AC004706.3-202ENST00000621574 984 ntBASIC16.4■□□□□ 0.22
LRIT2A6NDA9 AC107918.4-202ENST00000641623 219 ntBASIC16.4■□□□□ 0.22
LRIT2A6NDA9 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT2A6NDA9 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT2A6NDA9 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT2A6NDA9 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT2A6NDA9 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT2A6NDA9 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT2A6NDA9 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT2A6NDA9 AL590787.1-201ENST00000568856 1315 ntBASIC16.4■□□□□ 0.22
LRIT2A6NDA9 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT2A6NDA9 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT2A6NDA9 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRIT2A6NDA9 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRIT2A6NDA9 AC020916.1-201ENST00000587762 1774 ntBASIC16.39■□□□□ 0.21
LRIT2A6NDA9 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRIT2A6NDA9 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRIT2A6NDA9 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRIT2A6NDA9 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LRIT2A6NDA9 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRIT2A6NDA9 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LRIT2A6NDA9 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRIT2A6NDA9 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRIT2A6NDA9 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRIT2A6NDA9 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRIT2A6NDA9 LAGE3P1-201ENST00000425356 484 ntBASIC16.39■□□□□ 0.21
LRIT2A6NDA9 RPS2P1-201ENST00000434010 821 ntBASIC16.39■□□□□ 0.21
LRIT2A6NDA9 TPM4P1-201ENST00000436100 807 ntBASIC16.39■□□□□ 0.21
LRIT2A6NDA9 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LRIT2A6NDA9 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRIT2A6NDA9 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.39■□□□□ 0.21
LRIT2A6NDA9 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LRIT2A6NDA9 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms