Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV3S1A0A5B6 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 AC010460.3-201ENST00000511359 1579 ntBASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 TSPY14P-201ENST00000303979 915 ntBASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 AP003071.4-201ENST00000562276 1284 ntBASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 AC092850.2-201ENST00000623821 2697 ntBASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TCRBV3S1A0A5B6 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 ME2P1-201ENST00000426028 1970 ntBASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 INGX-201ENST00000359239 846 ntBASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 MTCL1P1-201ENST00000446207 792 ntBASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 AC090192.1-201ENST00000517740 490 ntBASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 C2orf69P3-201ENST00000565542 1120 ntBASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 AC006538.1-201ENST00000567905 1585 ntBASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.17■□□□□ 0.18
TCRBV3S1A0A5B6 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 AL390955.1-201ENST00000428694 934 ntBASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.16■□□□□ 0.18
TCRBV3S1A0A5B6 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms