Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
LOC102724428A0A0B4J2F2 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC21.76■■□□□ 1.07
LOC102724428A0A0B4J2F2 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC21.76■■□□□ 1.07
LOC102724428A0A0B4J2F2 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.76■■□□□ 1.07
LOC102724428A0A0B4J2F2 HCG4-201ENST00000418983 998 ntBASIC21.76■■□□□ 1.07
LOC102724428A0A0B4J2F2 AC241585.1-201ENST00000433527 519 ntBASIC21.76■■□□□ 1.07
LOC102724428A0A0B4J2F2 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC21.76■■□□□ 1.07
LOC102724428A0A0B4J2F2 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC21.76■■□□□ 1.07
LOC102724428A0A0B4J2F2 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC21.76■■□□□ 1.07
LOC102724428A0A0B4J2F2 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC21.76■■□□□ 1.07
LOC102724428A0A0B4J2F2 MEIS3P1-201ENST00000495167 958 ntBASIC21.76■■□□□ 1.07
LOC102724428A0A0B4J2F2 MTRF1LP2-201ENST00000506027 1122 ntBASIC21.76■■□□□ 1.07
LOC102724428A0A0B4J2F2 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LOC102724428A0A0B4J2F2 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC21.76■■□□□ 1.07
LOC102724428A0A0B4J2F2 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LOC102724428A0A0B4J2F2 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
LOC102724428A0A0B4J2F2 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
LOC102724428A0A0B4J2F2 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LOC102724428A0A0B4J2F2 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LOC102724428A0A0B4J2F2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.75■■□□□ 1.07
LOC102724428A0A0B4J2F2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LOC102724428A0A0B4J2F2 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LOC102724428A0A0B4J2F2 TDG-209ENST00000544861 1387 ntTSL 2 BASIC21.75■■□□□ 1.07
LOC102724428A0A0B4J2F2 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LOC102724428A0A0B4J2F2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
LOC102724428A0A0B4J2F2 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LOC102724428A0A0B4J2F2 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LOC102724428A0A0B4J2F2 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LOC102724428A0A0B4J2F2 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
LOC102724428A0A0B4J2F2 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
LOC102724428A0A0B4J2F2 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC21.75■■□□□ 1.07
LOC102724428A0A0B4J2F2 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC21.75■■□□□ 1.07
LOC102724428A0A0B4J2F2 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LOC102724428A0A0B4J2F2 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC21.75■■□□□ 1.07
LOC102724428A0A0B4J2F2 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
LOC102724428A0A0B4J2F2 AL031055.1-201ENST00000606362 631 ntBASIC21.75■■□□□ 1.07
LOC102724428A0A0B4J2F2 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LOC102724428A0A0B4J2F2 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LOC102724428A0A0B4J2F2 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LOC102724428A0A0B4J2F2 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
LOC102724428A0A0B4J2F2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.74■■□□□ 1.07
LOC102724428A0A0B4J2F2 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC21.74■■□□□ 1.07
LOC102724428A0A0B4J2F2 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LOC102724428A0A0B4J2F2 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LOC102724428A0A0B4J2F2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LOC102724428A0A0B4J2F2 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC21.74■■□□□ 1.07
LOC102724428A0A0B4J2F2 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC21.74■■□□□ 1.07
LOC102724428A0A0B4J2F2 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LOC102724428A0A0B4J2F2 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC21.74■■□□□ 1.07
LOC102724428A0A0B4J2F2 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC21.74■■□□□ 1.07
LOC102724428A0A0B4J2F2 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
LOC102724428A0A0B4J2F2 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC21.74■■□□□ 1.07
LOC102724428A0A0B4J2F2 COQ6-210ENST00000554920 649 ntTSL 3 BASIC21.74■■□□□ 1.07
LOC102724428A0A0B4J2F2 SPDYE22P-201ENST00000582158 798 ntBASIC21.74■■□□□ 1.07
LOC102724428A0A0B4J2F2 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC21.74■■□□□ 1.07
LOC102724428A0A0B4J2F2 SLC22A20-204ENST00000530038 1673 ntBASIC21.74■■□□□ 1.07
LOC102724428A0A0B4J2F2 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.74■■□□□ 1.07
LOC102724428A0A0B4J2F2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.74■■□□□ 1.07
LOC102724428A0A0B4J2F2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LOC102724428A0A0B4J2F2 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
LOC102724428A0A0B4J2F2 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LOC102724428A0A0B4J2F2 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
LOC102724428A0A0B4J2F2 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
LOC102724428A0A0B4J2F2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LOC102724428A0A0B4J2F2 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
LOC102724428A0A0B4J2F2 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.73■■□□□ 1.07
LOC102724428A0A0B4J2F2 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
LOC102724428A0A0B4J2F2 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LOC102724428A0A0B4J2F2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
LOC102724428A0A0B4J2F2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
LOC102724428A0A0B4J2F2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
LOC102724428A0A0B4J2F2 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC21.73■■□□□ 1.07
LOC102724428A0A0B4J2F2 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC21.73■■□□□ 1.07
LOC102724428A0A0B4J2F2 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC21.73■■□□□ 1.07
LOC102724428A0A0B4J2F2 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC21.73■■□□□ 1.07
LOC102724428A0A0B4J2F2 CR383656.12-201ENST00000549567 513 ntBASIC21.73■■□□□ 1.07
LOC102724428A0A0B4J2F2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC21.73■■□□□ 1.07
LOC102724428A0A0B4J2F2 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
LOC102724428A0A0B4J2F2 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC21.73■■□□□ 1.07
LOC102724428A0A0B4J2F2 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC21.73■■□□□ 1.07
LOC102724428A0A0B4J2F2 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC21.73■■□□□ 1.07
LOC102724428A0A0B4J2F2 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LOC102724428A0A0B4J2F2 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LOC102724428A0A0B4J2F2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LOC102724428A0A0B4J2F2 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LOC102724428A0A0B4J2F2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LOC102724428A0A0B4J2F2 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LOC102724428A0A0B4J2F2 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
LOC102724428A0A0B4J2F2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
LOC102724428A0A0B4J2F2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.72■■□□□ 1.07
LOC102724428A0A0B4J2F2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LOC102724428A0A0B4J2F2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
LOC102724428A0A0B4J2F2 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC21.72■■□□□ 1.07
LOC102724428A0A0B4J2F2 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
LOC102724428A0A0B4J2F2 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LOC102724428A0A0B4J2F2 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LOC102724428A0A0B4J2F2 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC21.72■■□□□ 1.07
LOC102724428A0A0B4J2F2 TSSK5P-201ENST00000423978 907 ntBASIC21.72■■□□□ 1.07
LOC102724428A0A0B4J2F2 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC21.72■■□□□ 1.07
LOC102724428A0A0B4J2F2 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms