Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYP46A1Q9Y6A2 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CYP46A1Q9Y6A2 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.53■□□□□ 0.88
CYP46A1Q9Y6A2 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CYP46A1Q9Y6A2 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CYP46A1Q9Y6A2 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CYP46A1Q9Y6A2 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CYP46A1Q9Y6A2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
CYP46A1Q9Y6A2 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
CYP46A1Q9Y6A2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CYP46A1Q9Y6A2 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CYP46A1Q9Y6A2 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.53■□□□□ 0.88
CYP46A1Q9Y6A2 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.53■□□□□ 0.88
CYP46A1Q9Y6A2 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CYP46A1Q9Y6A2 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CYP46A1Q9Y6A2 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CYP46A1Q9Y6A2 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CYP46A1Q9Y6A2 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.53■□□□□ 0.88
CYP46A1Q9Y6A2 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.53■□□□□ 0.88
CYP46A1Q9Y6A2 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CYP46A1Q9Y6A2 ATP5G2P1-201ENST00000433580 426 ntBASIC20.53■□□□□ 0.88
CYP46A1Q9Y6A2 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CYP46A1Q9Y6A2 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.53■□□□□ 0.88
CYP46A1Q9Y6A2 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CYP46A1Q9Y6A2 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CYP46A1Q9Y6A2 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.53■□□□□ 0.88
CYP46A1Q9Y6A2 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CYP46A1Q9Y6A2 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.53■□□□□ 0.88
CYP46A1Q9Y6A2 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CYP46A1Q9Y6A2 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CYP46A1Q9Y6A2 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CYP46A1Q9Y6A2 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CYP46A1Q9Y6A2 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.53■□□□□ 0.88
CYP46A1Q9Y6A2 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CYP46A1Q9Y6A2 AC005915.1-201ENST00000624912 2018 ntBASIC20.53■□□□□ 0.88
CYP46A1Q9Y6A2 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CYP46A1Q9Y6A2 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CYP46A1Q9Y6A2 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
CYP46A1Q9Y6A2 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CYP46A1Q9Y6A2 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CYP46A1Q9Y6A2 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
CYP46A1Q9Y6A2 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CYP46A1Q9Y6A2 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CYP46A1Q9Y6A2 AC105020.1-201ENST00000435356 2205 ntBASIC20.52■□□□□ 0.88
CYP46A1Q9Y6A2 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CYP46A1Q9Y6A2 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CYP46A1Q9Y6A2 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
CYP46A1Q9Y6A2 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.52■□□□□ 0.88
CYP46A1Q9Y6A2 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.52■□□□□ 0.88
CYP46A1Q9Y6A2 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.52■□□□□ 0.88
CYP46A1Q9Y6A2 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CYP46A1Q9Y6A2 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.52■□□□□ 0.88
CYP46A1Q9Y6A2 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CYP46A1Q9Y6A2 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.52■□□□□ 0.88
CYP46A1Q9Y6A2 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CYP46A1Q9Y6A2 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CYP46A1Q9Y6A2 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.52■□□□□ 0.87
CYP46A1Q9Y6A2 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
CYP46A1Q9Y6A2 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CYP46A1Q9Y6A2 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.87
CYP46A1Q9Y6A2 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
CYP46A1Q9Y6A2 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CYP46A1Q9Y6A2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.51■□□□□ 0.87
CYP46A1Q9Y6A2 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CYP46A1Q9Y6A2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
CYP46A1Q9Y6A2 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CYP46A1Q9Y6A2 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CYP46A1Q9Y6A2 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.51■□□□□ 0.87
CYP46A1Q9Y6A2 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20.51■□□□□ 0.87
CYP46A1Q9Y6A2 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.51■□□□□ 0.87
CYP46A1Q9Y6A2 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CYP46A1Q9Y6A2 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.51■□□□□ 0.87
CYP46A1Q9Y6A2 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CYP46A1Q9Y6A2 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CYP46A1Q9Y6A2 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CYP46A1Q9Y6A2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CYP46A1Q9Y6A2 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CYP46A1Q9Y6A2 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CYP46A1Q9Y6A2 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.51■□□□□ 0.87
CYP46A1Q9Y6A2 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.51■□□□□ 0.87
CYP46A1Q9Y6A2 AC099336.1-202ENST00000602961 463 ntBASIC20.51■□□□□ 0.87
CYP46A1Q9Y6A2 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.51■□□□□ 0.87
CYP46A1Q9Y6A2 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.51■□□□□ 0.87
CYP46A1Q9Y6A2 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CYP46A1Q9Y6A2 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CYP46A1Q9Y6A2 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CYP46A1Q9Y6A2 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CYP46A1Q9Y6A2 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CYP46A1Q9Y6A2 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
CYP46A1Q9Y6A2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CYP46A1Q9Y6A2 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CYP46A1Q9Y6A2 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CYP46A1Q9Y6A2 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CYP46A1Q9Y6A2 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CYP46A1Q9Y6A2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CYP46A1Q9Y6A2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CYP46A1Q9Y6A2 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CYP46A1Q9Y6A2 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.5■□□□□ 0.87
CYP46A1Q9Y6A2 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CYP46A1Q9Y6A2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms