Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC21.61■■□□□ 1.05
RTCBQ9Y3I0 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
RTCBQ9Y3I0 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RTCBQ9Y3I0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTCBQ9Y3I0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.61■■□□□ 1.05
RTCBQ9Y3I0 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RTCBQ9Y3I0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
RTCBQ9Y3I0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.61■■□□□ 1.05
RTCBQ9Y3I0 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTCBQ9Y3I0 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
RTCBQ9Y3I0 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
RTCBQ9Y3I0 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC21.61■■□□□ 1.05
RTCBQ9Y3I0 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RTCBQ9Y3I0 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC21.61■■□□□ 1.05
RTCBQ9Y3I0 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC21.61■■□□□ 1.05
RTCBQ9Y3I0 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RTCBQ9Y3I0 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC21.61■■□□□ 1.05
RTCBQ9Y3I0 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC21.61■■□□□ 1.05
RTCBQ9Y3I0 AP000842.3-202ENST00000569238 1080 ntBASIC21.61■■□□□ 1.05
RTCBQ9Y3I0 AC008267.7-201ENST00000624570 1194 ntBASIC21.61■■□□□ 1.05
RTCBQ9Y3I0 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC21.61■■□□□ 1.05
RTCBQ9Y3I0 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
RTCBQ9Y3I0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
RTCBQ9Y3I0 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.61■■□□□ 1.05
RTCBQ9Y3I0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.61■■□□□ 1.05
RTCBQ9Y3I0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
RTCBQ9Y3I0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTCBQ9Y3I0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTCBQ9Y3I0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
RTCBQ9Y3I0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
RTCBQ9Y3I0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC21.6■■□□□ 1.05
RTCBQ9Y3I0 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC21.6■■□□□ 1.05
RTCBQ9Y3I0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
RTCBQ9Y3I0 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC21.6■■□□□ 1.05
RTCBQ9Y3I0 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTCBQ9Y3I0 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTCBQ9Y3I0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTCBQ9Y3I0 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RTCBQ9Y3I0 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTCBQ9Y3I0 AC241585.1-201ENST00000433527 519 ntBASIC21.6■■□□□ 1.05
RTCBQ9Y3I0 AC004890.2-204ENST00000481968 304 ntBASIC21.6■■□□□ 1.05
RTCBQ9Y3I0 SERBP1P5-201ENST00000510079 1181 ntBASIC21.6■■□□□ 1.05
RTCBQ9Y3I0 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC21.6■■□□□ 1.05
RTCBQ9Y3I0 CR383656.12-201ENST00000549567 513 ntBASIC21.6■■□□□ 1.05
RTCBQ9Y3I0 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC21.6■■□□□ 1.05
RTCBQ9Y3I0 LINC01451-201ENST00000623792 534 ntBASIC21.6■■□□□ 1.05
RTCBQ9Y3I0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.6■■□□□ 1.05
RTCBQ9Y3I0 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.6■■□□□ 1.05
RTCBQ9Y3I0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
RTCBQ9Y3I0 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTCBQ9Y3I0 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
RTCBQ9Y3I0 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTCBQ9Y3I0 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RTCBQ9Y3I0 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RTCBQ9Y3I0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.59■■□□□ 1.05
RTCBQ9Y3I0 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTCBQ9Y3I0 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTCBQ9Y3I0 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC21.59■■□□□ 1.05
RTCBQ9Y3I0 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTCBQ9Y3I0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTCBQ9Y3I0 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTCBQ9Y3I0 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC21.59■■□□□ 1.05
RTCBQ9Y3I0 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC21.59■■□□□ 1.05
RTCBQ9Y3I0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC21.59■■□□□ 1.05
RTCBQ9Y3I0 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
RTCBQ9Y3I0 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC21.59■■□□□ 1.05
RTCBQ9Y3I0 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC21.59■■□□□ 1.05
RTCBQ9Y3I0 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC21.59■■□□□ 1.05
RTCBQ9Y3I0 AC027307.2-201ENST00000591252 911 ntBASIC21.59■■□□□ 1.05
RTCBQ9Y3I0 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
RTCBQ9Y3I0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RTCBQ9Y3I0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTCBQ9Y3I0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTCBQ9Y3I0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
RTCBQ9Y3I0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RTCBQ9Y3I0 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
RTCBQ9Y3I0 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC21.59■■□□□ 1.05
RTCBQ9Y3I0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTCBQ9Y3I0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
RTCBQ9Y3I0 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTCBQ9Y3I0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTCBQ9Y3I0 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RTCBQ9Y3I0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
RTCBQ9Y3I0 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RTCBQ9Y3I0 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
RTCBQ9Y3I0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RTCBQ9Y3I0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RTCBQ9Y3I0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RTCBQ9Y3I0 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RTCBQ9Y3I0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC21.58■■□□□ 1.05
RTCBQ9Y3I0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.58■■□□□ 1.05
RTCBQ9Y3I0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
RTCBQ9Y3I0 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RTCBQ9Y3I0 MIR346-201ENST00000362234 95 ntBASIC21.58■■□□□ 1.05
RTCBQ9Y3I0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC21.58■■□□□ 1.05
RTCBQ9Y3I0 CD81-202ENST00000381036 880 ntTSL 3 BASIC21.58■■□□□ 1.05
RTCBQ9Y3I0 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC21.58■■□□□ 1.05
RTCBQ9Y3I0 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC21.58■■□□□ 1.05
RTCBQ9Y3I0 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC21.58■■□□□ 1.05
RTCBQ9Y3I0 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms