Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
HACD3Q9P035 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.52■□□□□ 0.4
HACD3Q9P035 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HACD3Q9P035 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HACD3Q9P035 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
HACD3Q9P035 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.52■□□□□ 0.4
HACD3Q9P035 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
HACD3Q9P035 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HACD3Q9P035 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HACD3Q9P035 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
HACD3Q9P035 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.52■□□□□ 0.4
HACD3Q9P035 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HACD3Q9P035 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HACD3Q9P035 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HACD3Q9P035 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HACD3Q9P035 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.52■□□□□ 0.4
HACD3Q9P035 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HACD3Q9P035 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.52■□□□□ 0.4
HACD3Q9P035 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.52■□□□□ 0.4
HACD3Q9P035 RBM17P3-201ENST00000417687 1192 ntBASIC17.52■□□□□ 0.4
HACD3Q9P035 AC132008.2-207ENST00000454517 770 ntBASIC17.52■□□□□ 0.4
HACD3Q9P035 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.52■□□□□ 0.4
HACD3Q9P035 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
HACD3Q9P035 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.52■□□□□ 0.4
HACD3Q9P035 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
HACD3Q9P035 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
HACD3Q9P035 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
HACD3Q9P035 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HACD3Q9P035 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HACD3Q9P035 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HACD3Q9P035 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HACD3Q9P035 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
HACD3Q9P035 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.52■□□□□ 0.39
HACD3Q9P035 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
HACD3Q9P035 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
HACD3Q9P035 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HACD3Q9P035 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
HACD3Q9P035 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
HACD3Q9P035 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HACD3Q9P035 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
HACD3Q9P035 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.51■□□□□ 0.39
HACD3Q9P035 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HACD3Q9P035 AD000864.1-201ENST00000624076 2295 ntBASIC17.51■□□□□ 0.39
HACD3Q9P035 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HACD3Q9P035 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HACD3Q9P035 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HACD3Q9P035 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HACD3Q9P035 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HACD3Q9P035 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HACD3Q9P035 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.51■□□□□ 0.39
HACD3Q9P035 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HACD3Q9P035 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HACD3Q9P035 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HACD3Q9P035 AL020989.1-201ENST00000422979 469 ntBASIC17.51■□□□□ 0.39
HACD3Q9P035 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
HACD3Q9P035 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HACD3Q9P035 AC106795.1-205ENST00000512851 1056 ntBASIC17.51■□□□□ 0.39
HACD3Q9P035 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
HACD3Q9P035 AP005117.1-201ENST00000584346 1413 ntBASIC17.51■□□□□ 0.39
HACD3Q9P035 SIGLEC16-201ENST00000599858 1437 ntBASIC17.51■□□□□ 0.39
HACD3Q9P035 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HACD3Q9P035 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
HACD3Q9P035 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.51■□□□□ 0.39
HACD3Q9P035 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HACD3Q9P035 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HACD3Q9P035 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
HACD3Q9P035 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.51■□□□□ 0.39
HACD3Q9P035 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.51■□□□□ 0.39
HACD3Q9P035 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HACD3Q9P035 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HACD3Q9P035 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HACD3Q9P035 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
HACD3Q9P035 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HACD3Q9P035 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HACD3Q9P035 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HACD3Q9P035 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.5■□□□□ 0.39
HACD3Q9P035 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HACD3Q9P035 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HACD3Q9P035 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HACD3Q9P035 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.5■□□□□ 0.39
HACD3Q9P035 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HACD3Q9P035 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HACD3Q9P035 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HACD3Q9P035 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.5■□□□□ 0.39
HACD3Q9P035 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.5■□□□□ 0.39
HACD3Q9P035 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
HACD3Q9P035 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.5■□□□□ 0.39
HACD3Q9P035 SIGLEC30P-201ENST00000455569 941 ntBASIC17.5■□□□□ 0.39
HACD3Q9P035 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.5■□□□□ 0.39
HACD3Q9P035 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.5■□□□□ 0.39
HACD3Q9P035 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.5■□□□□ 0.39
HACD3Q9P035 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HACD3Q9P035 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HACD3Q9P035 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HACD3Q9P035 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HACD3Q9P035 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HACD3Q9P035 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
HACD3Q9P035 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HACD3Q9P035 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HACD3Q9P035 AC124067.4-201ENST00000519691 2379 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms