Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 AC005412.3-201ENST00000580309 715 ntBASIC19.68■□□□□ 0.74
HOXC10Q9NYD6 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC10Q9NYD6 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC10Q9NYD6 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC10Q9NYD6 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC10Q9NYD6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
HOXC10Q9NYD6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC10Q9NYD6 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC10Q9NYD6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC10Q9NYD6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC10Q9NYD6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC10Q9NYD6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.68■□□□□ 0.74
HOXC10Q9NYD6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC10Q9NYD6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
HOXC10Q9NYD6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 AC012317.2-201ENST00000623305 2251 ntBASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 AC005237.2-201ENST00000434368 219 ntBASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 KRT8P48-201ENST00000515599 1220 ntBASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 AC093520.2-201ENST00000561830 333 ntBASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 AC093512.1-201ENST00000617969 520 ntBASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC10Q9NYD6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HOXC10Q9NYD6 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXC10Q9NYD6 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC10Q9NYD6 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC10Q9NYD6 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
HOXC10Q9NYD6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC10Q9NYD6 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HOXC10Q9NYD6 AC133963.1-201ENST00000504166 1679 ntBASIC19.66■□□□□ 0.74
HOXC10Q9NYD6 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HOXC10Q9NYD6 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.66■□□□□ 0.74
HOXC10Q9NYD6 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC10Q9NYD6 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HOXC10Q9NYD6 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC10Q9NYD6 HMGA1P7-201ENST00000406908 502 ntBASIC19.66■□□□□ 0.74
HOXC10Q9NYD6 TFAMP1-201ENST00000412727 736 ntBASIC19.66■□□□□ 0.74
HOXC10Q9NYD6 AL592309.1-201ENST00000443127 649 ntBASIC19.66■□□□□ 0.74
HOXC10Q9NYD6 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.66■□□□□ 0.74
HOXC10Q9NYD6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXC10Q9NYD6 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
HOXC10Q9NYD6 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.66■□□□□ 0.74
HOXC10Q9NYD6 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.66■□□□□ 0.74
HOXC10Q9NYD6 AL161645.1-201ENST00000622716 1255 ntBASIC19.66■□□□□ 0.74
HOXC10Q9NYD6 AC009093.7-201ENST00000623853 1223 ntBASIC19.66■□□□□ 0.74
HOXC10Q9NYD6 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC10Q9NYD6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC10Q9NYD6 AKAP8P1-201ENST00000434743 1349 ntBASIC19.66■□□□□ 0.74
HOXC10Q9NYD6 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC10Q9NYD6 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC10Q9NYD6 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC10Q9NYD6 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC10Q9NYD6 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.66■□□□□ 0.74
HOXC10Q9NYD6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC10Q9NYD6 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC10Q9NYD6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXC10Q9NYD6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC10Q9NYD6 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC10Q9NYD6 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC10Q9NYD6 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.65■□□□□ 0.74
HOXC10Q9NYD6 RN7SL589P-201ENST00000481268 310 ntBASIC19.65■□□□□ 0.74
HOXC10Q9NYD6 SPCS2P1-201ENST00000561636 679 ntBASIC19.65■□□□□ 0.74
HOXC10Q9NYD6 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.65■□□□□ 0.74
HOXC10Q9NYD6 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.65■□□□□ 0.74
HOXC10Q9NYD6 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC10Q9NYD6 AL355312.1-201ENST00000407115 2176 ntBASIC19.65■□□□□ 0.74
HOXC10Q9NYD6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC10Q9NYD6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
HOXC10Q9NYD6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
HOXC10Q9NYD6 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXC10Q9NYD6 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms