Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.2■□□□□ 0.66
BLOC1S4Q9NUP1 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
BLOC1S4Q9NUP1 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
BLOC1S4Q9NUP1 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BLOC1S4Q9NUP1 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.19■□□□□ 0.66
BLOC1S4Q9NUP1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
BLOC1S4Q9NUP1 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
BLOC1S4Q9NUP1 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BLOC1S4Q9NUP1 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
BLOC1S4Q9NUP1 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BLOC1S4Q9NUP1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
BLOC1S4Q9NUP1 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BLOC1S4Q9NUP1 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
BLOC1S4Q9NUP1 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.19■□□□□ 0.66
BLOC1S4Q9NUP1 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.19■□□□□ 0.66
BLOC1S4Q9NUP1 AC104692.2-201ENST00000603054 253 ntBASIC19.19■□□□□ 0.66
BLOC1S4Q9NUP1 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BLOC1S4Q9NUP1 AC004706.3-202ENST00000621574 984 ntBASIC19.19■□□□□ 0.66
BLOC1S4Q9NUP1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BLOC1S4Q9NUP1 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
BLOC1S4Q9NUP1 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
BLOC1S4Q9NUP1 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.19■□□□□ 0.66
BLOC1S4Q9NUP1 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
BLOC1S4Q9NUP1 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BLOC1S4Q9NUP1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BLOC1S4Q9NUP1 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BLOC1S4Q9NUP1 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BLOC1S4Q9NUP1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BLOC1S4Q9NUP1 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
BLOC1S4Q9NUP1 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BLOC1S4Q9NUP1 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BLOC1S4Q9NUP1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BLOC1S4Q9NUP1 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
BLOC1S4Q9NUP1 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BLOC1S4Q9NUP1 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
BLOC1S4Q9NUP1 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BLOC1S4Q9NUP1 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.18■□□□□ 0.66
BLOC1S4Q9NUP1 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.18■□□□□ 0.66
BLOC1S4Q9NUP1 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BLOC1S4Q9NUP1 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.18■□□□□ 0.66
BLOC1S4Q9NUP1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.18■□□□□ 0.66
BLOC1S4Q9NUP1 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.18■□□□□ 0.66
BLOC1S4Q9NUP1 HNRNPDP1-201ENST00000439535 754 ntBASIC19.18■□□□□ 0.66
BLOC1S4Q9NUP1 AC018712.1-201ENST00000455767 687 ntBASIC19.18■□□□□ 0.66
BLOC1S4Q9NUP1 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
BLOC1S4Q9NUP1 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.18■□□□□ 0.66
BLOC1S4Q9NUP1 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.18■□□□□ 0.66
BLOC1S4Q9NUP1 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
BLOC1S4Q9NUP1 AC139887.3-201ENST00000568585 713 ntBASIC19.18■□□□□ 0.66
BLOC1S4Q9NUP1 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.18■□□□□ 0.66
BLOC1S4Q9NUP1 AL031008.1-201ENST00000619963 541 ntBASIC19.18■□□□□ 0.66
BLOC1S4Q9NUP1 AC107918.4-202ENST00000641623 219 ntBASIC19.18■□□□□ 0.66
BLOC1S4Q9NUP1 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BLOC1S4Q9NUP1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BLOC1S4Q9NUP1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.18■□□□□ 0.66
BLOC1S4Q9NUP1 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
BLOC1S4Q9NUP1 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BLOC1S4Q9NUP1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
BLOC1S4Q9NUP1 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BLOC1S4Q9NUP1 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.18■□□□□ 0.66
BLOC1S4Q9NUP1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BLOC1S4Q9NUP1 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 AC005915.1-201ENST00000624912 2018 ntBASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 AP002414.1-201ENST00000391405 1147 ntBASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 RNPS1P1-201ENST00000507437 918 ntBASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 AC148477.8-201ENST00000624298 468 ntBASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 AC105020.1-201ENST00000435356 2205 ntBASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BLOC1S4Q9NUP1 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms