Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.43■□□□□ 0.54
CISHQ9NSE2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.43■□□□□ 0.54
CISHQ9NSE2 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.43■□□□□ 0.54
CISHQ9NSE2 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.43■□□□□ 0.54
CISHQ9NSE2 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.43■□□□□ 0.54
CISHQ9NSE2 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CISHQ9NSE2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CISHQ9NSE2 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CISHQ9NSE2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CISHQ9NSE2 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CISHQ9NSE2 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CISHQ9NSE2 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.43■□□□□ 0.54
CISHQ9NSE2 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.43■□□□□ 0.54
CISHQ9NSE2 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CISHQ9NSE2 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.43■□□□□ 0.54
CISHQ9NSE2 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.43■□□□□ 0.54
CISHQ9NSE2 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CISHQ9NSE2 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CISHQ9NSE2 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CISHQ9NSE2 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CISHQ9NSE2 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CISHQ9NSE2 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CISHQ9NSE2 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CISHQ9NSE2 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CISHQ9NSE2 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.42■□□□□ 0.54
CISHQ9NSE2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CISHQ9NSE2 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
CISHQ9NSE2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CISHQ9NSE2 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.42■□□□□ 0.54
CISHQ9NSE2 LAGE3P1-201ENST00000425356 484 ntBASIC18.42■□□□□ 0.54
CISHQ9NSE2 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.42■□□□□ 0.54
CISHQ9NSE2 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.42■□□□□ 0.54
CISHQ9NSE2 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.42■□□□□ 0.54
CISHQ9NSE2 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.42■□□□□ 0.54
CISHQ9NSE2 OR7E14P-202ENST00000530490 1290 ntBASIC18.42■□□□□ 0.54
CISHQ9NSE2 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.42■□□□□ 0.54
CISHQ9NSE2 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.42■□□□□ 0.54
CISHQ9NSE2 AL139424.1-201ENST00000607572 797 ntBASIC18.42■□□□□ 0.54
CISHQ9NSE2 AC004706.3-202ENST00000621574 984 ntBASIC18.42■□□□□ 0.54
CISHQ9NSE2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CISHQ9NSE2 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CISHQ9NSE2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CISHQ9NSE2 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CISHQ9NSE2 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CISHQ9NSE2 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CISHQ9NSE2 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.42■□□□□ 0.54
CISHQ9NSE2 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CISHQ9NSE2 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CISHQ9NSE2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.42■□□□□ 0.54
CISHQ9NSE2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CISHQ9NSE2 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.41■□□□□ 0.54
CISHQ9NSE2 OR6D1P-202ENST00000641007 5290 ntBASIC18.41■□□□□ 0.54
CISHQ9NSE2 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CISHQ9NSE2 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.41■□□□□ 0.54
CISHQ9NSE2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CISHQ9NSE2 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CISHQ9NSE2 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CISHQ9NSE2 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CISHQ9NSE2 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CISHQ9NSE2 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.41■□□□□ 0.54
CISHQ9NSE2 MRPL3P1-201ENST00000400109 1033 ntBASIC18.41■□□□□ 0.54
CISHQ9NSE2 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CISHQ9NSE2 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.41■□□□□ 0.54
CISHQ9NSE2 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.41■□□□□ 0.54
CISHQ9NSE2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.41■□□□□ 0.54
CISHQ9NSE2 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
CISHQ9NSE2 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.41■□□□□ 0.54
CISHQ9NSE2 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CISHQ9NSE2 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.41■□□□□ 0.54
CISHQ9NSE2 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CISHQ9NSE2 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CISHQ9NSE2 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CISHQ9NSE2 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CISHQ9NSE2 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CISHQ9NSE2 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CISHQ9NSE2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CISHQ9NSE2 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CISHQ9NSE2 AL590787.1-201ENST00000568856 1315 ntBASIC18.41■□□□□ 0.54
CISHQ9NSE2 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CISHQ9NSE2 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.41■□□□□ 0.54
CISHQ9NSE2 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CISHQ9NSE2 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CISHQ9NSE2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CISHQ9NSE2 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CISHQ9NSE2 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CISHQ9NSE2 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CISHQ9NSE2 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CISHQ9NSE2 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CISHQ9NSE2 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CISHQ9NSE2 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CISHQ9NSE2 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.4■□□□□ 0.54
CISHQ9NSE2 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CISHQ9NSE2 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CISHQ9NSE2 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CISHQ9NSE2 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CISHQ9NSE2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.4■□□□□ 0.54
CISHQ9NSE2 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CISHQ9NSE2 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CISHQ9NSE2 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CISHQ9NSE2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms