Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRDM9Q9NQV7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 SLC25A1P3-201ENST00000395415 828 ntBASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 AC006213.4-201ENST00000616184 634 ntBASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 AC093525.9-201ENST00000624961 1746 ntBASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRDM9Q9NQV7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 AC011270.2-201ENST00000624293 2550 ntBASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 RPS2P1-201ENST00000434010 821 ntBASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 OR7E14P-202ENST00000530490 1290 ntBASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 AC124947.2-201ENST00000547118 1133 ntBASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 AP001005.1-201ENST00000571755 1248 ntBASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 AL589182.2-201ENST00000619332 1049 ntBASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 AC148477.8-201ENST00000624298 468 ntBASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 PAX6-247ENST00000638965 979 ntTSL 5 BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRDM9Q9NQV7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms