Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC093520.2-201ENST00000561830 333 ntBASIC19.23■□□□□ 0.67
VTA1Q9NP79 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
VTA1Q9NP79 AC011467.4-201ENST00000594891 528 ntBASIC19.23■□□□□ 0.67
VTA1Q9NP79 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VTA1Q9NP79 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.23■□□□□ 0.67
VTA1Q9NP79 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VTA1Q9NP79 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.23■□□□□ 0.67
VTA1Q9NP79 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VTA1Q9NP79 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.23■□□□□ 0.67
VTA1Q9NP79 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.23■□□□□ 0.67
VTA1Q9NP79 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VTA1Q9NP79 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
VTA1Q9NP79 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
VTA1Q9NP79 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
VTA1Q9NP79 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VTA1Q9NP79 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VTA1Q9NP79 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
VTA1Q9NP79 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VTA1Q9NP79 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VTA1Q9NP79 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VTA1Q9NP79 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.22■□□□□ 0.67
VTA1Q9NP79 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
VTA1Q9NP79 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.22■□□□□ 0.67
VTA1Q9NP79 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VTA1Q9NP79 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.22■□□□□ 0.67
VTA1Q9NP79 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VTA1Q9NP79 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VTA1Q9NP79 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VTA1Q9NP79 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.22■□□□□ 0.67
VTA1Q9NP79 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.22■□□□□ 0.67
VTA1Q9NP79 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.22■□□□□ 0.67
VTA1Q9NP79 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.22■□□□□ 0.67
VTA1Q9NP79 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.22■□□□□ 0.67
VTA1Q9NP79 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.22■□□□□ 0.67
VTA1Q9NP79 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
VTA1Q9NP79 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
VTA1Q9NP79 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
VTA1Q9NP79 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VTA1Q9NP79 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
VTA1Q9NP79 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.22■□□□□ 0.67
VTA1Q9NP79 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
VTA1Q9NP79 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VTA1Q9NP79 AC012317.2-201ENST00000623305 2251 ntBASIC19.22■□□□□ 0.67
VTA1Q9NP79 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VTA1Q9NP79 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
VTA1Q9NP79 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VTA1Q9NP79 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.21■□□□□ 0.67
VTA1Q9NP79 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VTA1Q9NP79 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VTA1Q9NP79 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VTA1Q9NP79 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.21■□□□□ 0.67
VTA1Q9NP79 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.21■□□□□ 0.67
VTA1Q9NP79 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VTA1Q9NP79 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.21■□□□□ 0.67
VTA1Q9NP79 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VTA1Q9NP79 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
VTA1Q9NP79 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
VTA1Q9NP79 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VTA1Q9NP79 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VTA1Q9NP79 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.21■□□□□ 0.67
VTA1Q9NP79 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VTA1Q9NP79 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
VTA1Q9NP79 FAM8A3P-201ENST00000427218 844 ntBASIC19.21■□□□□ 0.67
VTA1Q9NP79 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VTA1Q9NP79 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.21■□□□□ 0.67
VTA1Q9NP79 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.21■□□□□ 0.67
VTA1Q9NP79 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.21■□□□□ 0.67
VTA1Q9NP79 AC093512.1-201ENST00000617969 520 ntBASIC19.21■□□□□ 0.67
VTA1Q9NP79 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.21■□□□□ 0.67
VTA1Q9NP79 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VTA1Q9NP79 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VTA1Q9NP79 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VTA1Q9NP79 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VTA1Q9NP79 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
VTA1Q9NP79 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VTA1Q9NP79 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VTA1Q9NP79 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VTA1Q9NP79 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VTA1Q9NP79 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VTA1Q9NP79 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VTA1Q9NP79 AL355312.1-201ENST00000407115 2176 ntBASIC19.2■□□□□ 0.66
VTA1Q9NP79 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.2■□□□□ 0.66
VTA1Q9NP79 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
VTA1Q9NP79 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VTA1Q9NP79 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
VTA1Q9NP79 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VTA1Q9NP79 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VTA1Q9NP79 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.2■□□□□ 0.66
VTA1Q9NP79 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VTA1Q9NP79 HMGA1P7-201ENST00000406908 502 ntBASIC19.2■□□□□ 0.66
VTA1Q9NP79 TFAMP1-201ENST00000412727 736 ntBASIC19.2■□□□□ 0.66
VTA1Q9NP79 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.2■□□□□ 0.66
VTA1Q9NP79 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.2■□□□□ 0.66
VTA1Q9NP79 RARRES2P8-201ENST00000566335 367 ntBASIC19.2■□□□□ 0.66
VTA1Q9NP79 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.2■□□□□ 0.66
VTA1Q9NP79 AC092364.2-202ENST00000597012 1073 ntBASIC19.2■□□□□ 0.66
VTA1Q9NP79 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.2■□□□□ 0.66
VTA1Q9NP79 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VTA1Q9NP79 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.2■□□□□ 0.66
VTA1Q9NP79 AKAP8P1-201ENST00000434743 1349 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms