Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 AC026691.1-201ENST00000602502 2017 ntBASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
SND1-IT1Q9HBX3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC11.63□□□□□ -0.55
SND1-IT1Q9HBX3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 REXO1L11P-201ENST00000620964 1927 ntBASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 AL355355.2-201ENST00000442321 338 ntBASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 CCR12P-201ENST00000446203 998 ntBASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SND1-IT1Q9HBX3 BX088651.1-201ENST00000540551 451 ntBASIC11.62□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms