Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATP6V0A4Q9HBG4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.23■□□□□ 0.67
ATP6V0A4Q9HBG4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.23■□□□□ 0.67
ATP6V0A4Q9HBG4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ATP6V0A4Q9HBG4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ATP6V0A4Q9HBG4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.23■□□□□ 0.67
ATP6V0A4Q9HBG4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATP6V0A4Q9HBG4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.23■□□□□ 0.67
ATP6V0A4Q9HBG4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
ATP6V0A4Q9HBG4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.23■□□□□ 0.67
ATP6V0A4Q9HBG4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP6V0A4Q9HBG4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ATP6V0A4Q9HBG4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATP6V0A4Q9HBG4 AC067852.2-201ENST00000590513 2313 ntBASIC19.23■□□□□ 0.67
ATP6V0A4Q9HBG4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP6V0A4Q9HBG4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.23■□□□□ 0.67
ATP6V0A4Q9HBG4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
ATP6V0A4Q9HBG4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP6V0A4Q9HBG4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP6V0A4Q9HBG4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.22■□□□□ 0.67
ATP6V0A4Q9HBG4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP6V0A4Q9HBG4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ATP6V0A4Q9HBG4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.22■□□□□ 0.67
ATP6V0A4Q9HBG4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP6V0A4Q9HBG4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP6V0A4Q9HBG4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP6V0A4Q9HBG4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.22■□□□□ 0.67
ATP6V0A4Q9HBG4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP6V0A4Q9HBG4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.22■□□□□ 0.67
ATP6V0A4Q9HBG4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.22■□□□□ 0.67
ATP6V0A4Q9HBG4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.22■□□□□ 0.67
ATP6V0A4Q9HBG4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP6V0A4Q9HBG4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.22■□□□□ 0.67
ATP6V0A4Q9HBG4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.22■□□□□ 0.67
ATP6V0A4Q9HBG4 AL353135.1-201ENST00000606729 504 ntBASIC19.22■□□□□ 0.67
ATP6V0A4Q9HBG4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP6V0A4Q9HBG4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
ATP6V0A4Q9HBG4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP6V0A4Q9HBG4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ATP6V0A4Q9HBG4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP6V0A4Q9HBG4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP6V0A4Q9HBG4 AC006504.4-201ENST00000592118 1568 ntBASIC19.22■□□□□ 0.67
ATP6V0A4Q9HBG4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP6V0A4Q9HBG4 TNRC18P3-201ENST00000441896 2691 ntBASIC19.22■□□□□ 0.67
ATP6V0A4Q9HBG4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP6V0A4Q9HBG4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
ATP6V0A4Q9HBG4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
ATP6V0A4Q9HBG4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP6V0A4Q9HBG4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.22■□□□□ 0.67
ATP6V0A4Q9HBG4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP6V0A4Q9HBG4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.22■□□□□ 0.67
ATP6V0A4Q9HBG4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP6V0A4Q9HBG4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP6V0A4Q9HBG4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATP6V0A4Q9HBG4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATP6V0A4Q9HBG4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
ATP6V0A4Q9HBG4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP6V0A4Q9HBG4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP6V0A4Q9HBG4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP6V0A4Q9HBG4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP6V0A4Q9HBG4 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATP6V0A4Q9HBG4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP6V0A4Q9HBG4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ATP6V0A4Q9HBG4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.21■□□□□ 0.67
ATP6V0A4Q9HBG4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
ATP6V0A4Q9HBG4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.21■□□□□ 0.67
ATP6V0A4Q9HBG4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP6V0A4Q9HBG4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.21■□□□□ 0.67
ATP6V0A4Q9HBG4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.21■□□□□ 0.67
ATP6V0A4Q9HBG4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP6V0A4Q9HBG4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ATP6V0A4Q9HBG4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATP6V0A4Q9HBG4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP6V0A4Q9HBG4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATP6V0A4Q9HBG4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATP6V0A4Q9HBG4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.21■□□□□ 0.67
ATP6V0A4Q9HBG4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.21■□□□□ 0.67
ATP6V0A4Q9HBG4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
ATP6V0A4Q9HBG4 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.21■□□□□ 0.67
ATP6V0A4Q9HBG4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATP6V0A4Q9HBG4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
ATP6V0A4Q9HBG4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.21■□□□□ 0.66
ATP6V0A4Q9HBG4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ATP6V0A4Q9HBG4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP6V0A4Q9HBG4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP6V0A4Q9HBG4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ATP6V0A4Q9HBG4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP6V0A4Q9HBG4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP6V0A4Q9HBG4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP6V0A4Q9HBG4 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP6V0A4Q9HBG4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.2■□□□□ 0.66
ATP6V0A4Q9HBG4 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.2■□□□□ 0.66
ATP6V0A4Q9HBG4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.2■□□□□ 0.66
ATP6V0A4Q9HBG4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.2■□□□□ 0.66
ATP6V0A4Q9HBG4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP6V0A4Q9HBG4 AC005593.1-201ENST00000624894 515 ntBASIC19.2■□□□□ 0.66
ATP6V0A4Q9HBG4 PGM5P2-202ENST00000637225 1043 ntBASIC19.2■□□□□ 0.66
ATP6V0A4Q9HBG4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP6V0A4Q9HBG4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP6V0A4Q9HBG4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms