Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LHX5Q9H2C1 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LHX5Q9H2C1 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.22■□□□□ 0.51
LHX5Q9H2C1 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LHX5Q9H2C1 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LHX5Q9H2C1 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LHX5Q9H2C1 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LHX5Q9H2C1 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LHX5Q9H2C1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LHX5Q9H2C1 FRMD8P1-201ENST00000440433 1524 ntBASIC18.22■□□□□ 0.51
LHX5Q9H2C1 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LHX5Q9H2C1 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.22■□□□□ 0.51
LHX5Q9H2C1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LHX5Q9H2C1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
LHX5Q9H2C1 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LHX5Q9H2C1 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LHX5Q9H2C1 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LHX5Q9H2C1 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LHX5Q9H2C1 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.21■□□□□ 0.51
LHX5Q9H2C1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LHX5Q9H2C1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LHX5Q9H2C1 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LHX5Q9H2C1 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LHX5Q9H2C1 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LHX5Q9H2C1 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LHX5Q9H2C1 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LHX5Q9H2C1 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.21■□□□□ 0.51
LHX5Q9H2C1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LHX5Q9H2C1 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LHX5Q9H2C1 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LHX5Q9H2C1 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LHX5Q9H2C1 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LHX5Q9H2C1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.21■□□□□ 0.51
LHX5Q9H2C1 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.21■□□□□ 0.51
LHX5Q9H2C1 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.21■□□□□ 0.51
LHX5Q9H2C1 AC139887.3-201ENST00000568585 713 ntBASIC18.21■□□□□ 0.51
LHX5Q9H2C1 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.21■□□□□ 0.51
LHX5Q9H2C1 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.21■□□□□ 0.51
LHX5Q9H2C1 AC025062.2-201ENST00000605477 670 ntBASIC18.21■□□□□ 0.51
LHX5Q9H2C1 AL139424.1-201ENST00000607572 797 ntBASIC18.21■□□□□ 0.51
LHX5Q9H2C1 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
LHX5Q9H2C1 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
LHX5Q9H2C1 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
LHX5Q9H2C1 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.21■□□□□ 0.51
LHX5Q9H2C1 AC060834.1-201ENST00000443027 2032 ntBASIC18.21■□□□□ 0.51
LHX5Q9H2C1 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
LHX5Q9H2C1 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LHX5Q9H2C1 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LHX5Q9H2C1 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LHX5Q9H2C1 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LHX5Q9H2C1 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LHX5Q9H2C1 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
LHX5Q9H2C1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
LHX5Q9H2C1 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
LHX5Q9H2C1 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
LHX5Q9H2C1 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.2■□□□□ 0.5
LHX5Q9H2C1 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LHX5Q9H2C1 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LHX5Q9H2C1 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LHX5Q9H2C1 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
LHX5Q9H2C1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
LHX5Q9H2C1 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LHX5Q9H2C1 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LHX5Q9H2C1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.2■□□□□ 0.5
LHX5Q9H2C1 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LHX5Q9H2C1 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LHX5Q9H2C1 AL022342.1-201ENST00000400363 863 ntBASIC18.2■□□□□ 0.5
LHX5Q9H2C1 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.2■□□□□ 0.5
LHX5Q9H2C1 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.2■□□□□ 0.5
LHX5Q9H2C1 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.2■□□□□ 0.5
LHX5Q9H2C1 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LHX5Q9H2C1 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.2■□□□□ 0.5
LHX5Q9H2C1 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.2■□□□□ 0.5
LHX5Q9H2C1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.2■□□□□ 0.5
LHX5Q9H2C1 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.2■□□□□ 0.5
LHX5Q9H2C1 AC004706.3-202ENST00000621574 984 ntBASIC18.2■□□□□ 0.5
LHX5Q9H2C1 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
LHX5Q9H2C1 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LHX5Q9H2C1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LHX5Q9H2C1 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LHX5Q9H2C1 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.2■□□□□ 0.5
LHX5Q9H2C1 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LHX5Q9H2C1 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
LHX5Q9H2C1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.2■□□□□ 0.5
LHX5Q9H2C1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LHX5Q9H2C1 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
LHX5Q9H2C1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.2■□□□□ 0.5
LHX5Q9H2C1 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.2■□□□□ 0.5
LHX5Q9H2C1 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.2■□□□□ 0.5
LHX5Q9H2C1 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LHX5Q9H2C1 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LHX5Q9H2C1 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LHX5Q9H2C1 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.19■□□□□ 0.5
LHX5Q9H2C1 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.19■□□□□ 0.5
LHX5Q9H2C1 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LHX5Q9H2C1 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.19■□□□□ 0.5
LHX5Q9H2C1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LHX5Q9H2C1 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LHX5Q9H2C1 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LHX5Q9H2C1 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms