Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 AC022188.1-201ENST00000620960 1664 ntBASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 AC100803.2-201ENST00000562459 1963 ntBASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 MIPEPP3-201ENST00000412105 444 ntBASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 AC004951.3-201ENST00000418645 1148 ntBASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 AC091390.4-202ENST00000476426 537 ntBASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 SLC29A4P2-201ENST00000504749 1089 ntBASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 AL445675.2-201ENST00000620291 557 ntBASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 Six3os1_6.1-201ENST00000620790 196 ntBASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 ANKRD26P3-201ENST00000454044 2748 ntBASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LCE3DQ9BYE3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms