Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHANK2-AS3Q9BTD1 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
SHANK2-AS3Q9BTD1 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC13.33□□□□□ -0.27
SHANK2-AS3Q9BTD1 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
SHANK2-AS3Q9BTD1 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.27
SHANK2-AS3Q9BTD1 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC13.33□□□□□ -0.27
SHANK2-AS3Q9BTD1 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHANK2-AS3Q9BTD1 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHANK2-AS3Q9BTD1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SHANK2-AS3Q9BTD1 AL049757.1-201ENST00000616842 1596 ntBASIC13.33□□□□□ -0.28
SHANK2-AS3Q9BTD1 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHANK2-AS3Q9BTD1 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHANK2-AS3Q9BTD1 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SHANK2-AS3Q9BTD1 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHANK2-AS3Q9BTD1 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SHANK2-AS3Q9BTD1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.33□□□□□ -0.28
SHANK2-AS3Q9BTD1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHANK2-AS3Q9BTD1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHANK2-AS3Q9BTD1 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHANK2-AS3Q9BTD1 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHANK2-AS3Q9BTD1 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SHANK2-AS3Q9BTD1 FAM220CP-201ENST00000395253 831 ntBASIC13.33□□□□□ -0.28
SHANK2-AS3Q9BTD1 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHANK2-AS3Q9BTD1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SHANK2-AS3Q9BTD1 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC13.33□□□□□ -0.28
SHANK2-AS3Q9BTD1 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC13.33□□□□□ -0.28
SHANK2-AS3Q9BTD1 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SHANK2-AS3Q9BTD1 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC13.33□□□□□ -0.28
SHANK2-AS3Q9BTD1 AC073912.3-201ENST00000624414 853 ntBASIC13.33□□□□□ -0.28
SHANK2-AS3Q9BTD1 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHANK2-AS3Q9BTD1 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC13.33□□□□□ -0.28
SHANK2-AS3Q9BTD1 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHANK2-AS3Q9BTD1 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHANK2-AS3Q9BTD1 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHANK2-AS3Q9BTD1 UBALD1-205ENST00000590891 2641 ntBASIC13.33□□□□□ -0.28
SHANK2-AS3Q9BTD1 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHANK2-AS3Q9BTD1 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC13.33□□□□□ -0.28
SHANK2-AS3Q9BTD1 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.33□□□□□ -0.28
SHANK2-AS3Q9BTD1 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC13.33□□□□□ -0.28
SHANK2-AS3Q9BTD1 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SHANK2-AS3Q9BTD1 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.33□□□□□ -0.28
SHANK2-AS3Q9BTD1 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 KRT18P57-201ENST00000443599 1254 ntBASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 SPDYE13P-201ENST00000445314 798 ntBASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 RN7SL606P-201ENST00000472779 293 ntBASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 STK25P1-201ENST00000585406 838 ntBASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 AL138831.2-201ENST00000606564 490 ntBASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 AL353801.3-201ENST00000609898 542 ntBASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 AC006011.2-201ENST00000621313 1158 ntBASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 AC066615.1-201ENST00000640911 628 ntBASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SHANK2-AS3Q9BTD1 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC13.31□□□□□ -0.28
SHANK2-AS3Q9BTD1 AL603756.1-201ENST00000606511 2163 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms