Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CMSS1Q9BQ75 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 TSPY26P-202ENST00000565928 3884 ntBASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 DOC2GP-204ENST00000639052 2548 ntBASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 RASA4DP-201ENST00000460726 1199 ntBASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 AL391807.1-203ENST00000604392 2365 ntBASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMSS1Q9BQ75 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.83□□□□□ -0.03
CMSS1Q9BQ75 LINC01311-201ENST00000565162 1445 ntBASIC14.83□□□□□ -0.03
CMSS1Q9BQ75 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CMSS1Q9BQ75 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
CMSS1Q9BQ75 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
CMSS1Q9BQ75 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CMSS1Q9BQ75 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CMSS1Q9BQ75 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CMSS1Q9BQ75 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.03
CMSS1Q9BQ75 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CMSS1Q9BQ75 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
CMSS1Q9BQ75 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
CMSS1Q9BQ75 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.83□□□□□ -0.03
CMSS1Q9BQ75 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.83□□□□□ -0.03
CMSS1Q9BQ75 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.83□□□□□ -0.03
CMSS1Q9BQ75 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
CMSS1Q9BQ75 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CMSS1Q9BQ75 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CMSS1Q9BQ75 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CMSS1Q9BQ75 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.83□□□□□ -0.04
CMSS1Q9BQ75 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CMSS1Q9BQ75 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CMSS1Q9BQ75 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.83□□□□□ -0.04
CMSS1Q9BQ75 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CMSS1Q9BQ75 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.83□□□□□ -0.04
CMSS1Q9BQ75 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CMSS1Q9BQ75 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.83□□□□□ -0.04
CMSS1Q9BQ75 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.83□□□□□ -0.04
CMSS1Q9BQ75 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.83□□□□□ -0.04
CMSS1Q9BQ75 AC140113.3-201ENST00000605663 199 ntBASIC14.83□□□□□ -0.04
CMSS1Q9BQ75 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CMSS1Q9BQ75 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.83□□□□□ -0.04
CMSS1Q9BQ75 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CMSS1Q9BQ75 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CMSS1Q9BQ75 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CMSS1Q9BQ75 KRT18P22-201ENST00000402024 1347 ntBASIC14.83□□□□□ -0.04
CMSS1Q9BQ75 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
CMSS1Q9BQ75 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CMSS1Q9BQ75 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CMSS1Q9BQ75 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CMSS1Q9BQ75 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CMSS1Q9BQ75 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.83□□□□□ -0.04
CMSS1Q9BQ75 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CMSS1Q9BQ75 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.83□□□□□ -0.04
CMSS1Q9BQ75 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CMSS1Q9BQ75 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CMSS1Q9BQ75 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.83□□□□□ -0.04
CMSS1Q9BQ75 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.83□□□□□ -0.04
CMSS1Q9BQ75 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CMSS1Q9BQ75 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CMSS1Q9BQ75 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CMSS1Q9BQ75 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.82□□□□□ -0.04
CMSS1Q9BQ75 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CMSS1Q9BQ75 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
CMSS1Q9BQ75 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.82□□□□□ -0.04
CMSS1Q9BQ75 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CMSS1Q9BQ75 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CMSS1Q9BQ75 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CMSS1Q9BQ75 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CMSS1Q9BQ75 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CMSS1Q9BQ75 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CMSS1Q9BQ75 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms