Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PHOX2BQ99453 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.47■□□□□ 0.39
PHOX2BQ99453 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PHOX2BQ99453 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PHOX2BQ99453 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PHOX2BQ99453 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.47■□□□□ 0.39
PHOX2BQ99453 GPS2P2-201ENST00000430745 888 ntBASIC17.47■□□□□ 0.39
PHOX2BQ99453 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PHOX2BQ99453 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.47■□□□□ 0.39
PHOX2BQ99453 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.47■□□□□ 0.39
PHOX2BQ99453 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.47■□□□□ 0.39
PHOX2BQ99453 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.47■□□□□ 0.39
PHOX2BQ99453 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.47■□□□□ 0.39
PHOX2BQ99453 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PHOX2BQ99453 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PHOX2BQ99453 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.47■□□□□ 0.39
PHOX2BQ99453 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PHOX2BQ99453 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PHOX2BQ99453 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.47■□□□□ 0.39
PHOX2BQ99453 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PHOX2BQ99453 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PHOX2BQ99453 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PHOX2BQ99453 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PHOX2BQ99453 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PHOX2BQ99453 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PHOX2BQ99453 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.47■□□□□ 0.39
PHOX2BQ99453 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PHOX2BQ99453 HCG11-201ENST00000411553 5696 ntBASIC17.47■□□□□ 0.39
PHOX2BQ99453 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PHOX2BQ99453 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PHOX2BQ99453 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.47■□□□□ 0.39
PHOX2BQ99453 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PHOX2BQ99453 NCF1C-201ENST00000438382 1427 ntBASIC17.47■□□□□ 0.39
PHOX2BQ99453 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PHOX2BQ99453 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PHOX2BQ99453 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PHOX2BQ99453 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PHOX2BQ99453 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PHOX2BQ99453 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.46■□□□□ 0.39
PHOX2BQ99453 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.46■□□□□ 0.39
PHOX2BQ99453 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.46■□□□□ 0.39
PHOX2BQ99453 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.46■□□□□ 0.39
PHOX2BQ99453 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
PHOX2BQ99453 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.46■□□□□ 0.39
PHOX2BQ99453 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PHOX2BQ99453 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PHOX2BQ99453 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PHOX2BQ99453 KRT18P32-201ENST00000424695 1287 ntBASIC17.46■□□□□ 0.39
PHOX2BQ99453 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.46■□□□□ 0.39
PHOX2BQ99453 DDX43P3-201ENST00000441064 443 ntBASIC17.46■□□□□ 0.39
PHOX2BQ99453 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.46■□□□□ 0.39
PHOX2BQ99453 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.46■□□□□ 0.39
PHOX2BQ99453 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PHOX2BQ99453 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.46■□□□□ 0.39
PHOX2BQ99453 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.46■□□□□ 0.39
PHOX2BQ99453 AC068587.10-201ENST00000641210 219 ntBASIC17.46■□□□□ 0.39
PHOX2BQ99453 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PHOX2BQ99453 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.46■□□□□ 0.39
PHOX2BQ99453 AC148477.5-201ENST00000625164 1645 ntBASIC17.46■□□□□ 0.39
PHOX2BQ99453 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PHOX2BQ99453 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.46■□□□□ 0.38
PHOX2BQ99453 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.46■□□□□ 0.38
PHOX2BQ99453 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
PHOX2BQ99453 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PHOX2BQ99453 AC008677.1-201ENST00000519230 1561 ntBASIC17.45■□□□□ 0.38
PHOX2BQ99453 AL133373.2-201ENST00000623187 2828 ntBASIC17.45■□□□□ 0.38
PHOX2BQ99453 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHOX2BQ99453 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
PHOX2BQ99453 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHOX2BQ99453 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHOX2BQ99453 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PHOX2BQ99453 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
PHOX2BQ99453 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHOX2BQ99453 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHOX2BQ99453 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHOX2BQ99453 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
PHOX2BQ99453 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.45■□□□□ 0.38
PHOX2BQ99453 MRPS18AP1-201ENST00000414458 589 ntBASIC17.45■□□□□ 0.38
PHOX2BQ99453 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.45■□□□□ 0.38
PHOX2BQ99453 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.45■□□□□ 0.38
PHOX2BQ99453 AL592309.1-201ENST00000443127 649 ntBASIC17.45■□□□□ 0.38
PHOX2BQ99453 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHOX2BQ99453 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.45■□□□□ 0.38
PHOX2BQ99453 AC097493.3-201ENST00000509725 367 ntBASIC17.45■□□□□ 0.38
PHOX2BQ99453 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.45■□□□□ 0.38
PHOX2BQ99453 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.45■□□□□ 0.38
PHOX2BQ99453 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.45■□□□□ 0.38
PHOX2BQ99453 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.45■□□□□ 0.38
PHOX2BQ99453 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
PHOX2BQ99453 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.45■□□□□ 0.38
PHOX2BQ99453 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.45■□□□□ 0.38
PHOX2BQ99453 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
PHOX2BQ99453 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHOX2BQ99453 AL805961.1-202ENST00000641562 540 ntBASIC17.45■□□□□ 0.38
PHOX2BQ99453 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHOX2BQ99453 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PHOX2BQ99453 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
PHOX2BQ99453 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHOX2BQ99453 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PHOX2BQ99453 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms