Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NEK1Q96PY6 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
NEK1Q96PY6 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NEK1Q96PY6 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.47■□□□□ 0.87
NEK1Q96PY6 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NEK1Q96PY6 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NEK1Q96PY6 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.47■□□□□ 0.87
NEK1Q96PY6 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
NEK1Q96PY6 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
NEK1Q96PY6 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
NEK1Q96PY6 AC097637.2-201ENST00000624096 1997 ntBASIC20.47■□□□□ 0.87
NEK1Q96PY6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NEK1Q96PY6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NEK1Q96PY6 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NEK1Q96PY6 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NEK1Q96PY6 RBM17P3-201ENST00000417687 1192 ntBASIC20.47■□□□□ 0.87
NEK1Q96PY6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.47■□□□□ 0.87
NEK1Q96PY6 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.47■□□□□ 0.87
NEK1Q96PY6 CLEC4GP1-201ENST00000596555 870 ntBASIC20.47■□□□□ 0.87
NEK1Q96PY6 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.47■□□□□ 0.87
NEK1Q96PY6 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NEK1Q96PY6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.47■□□□□ 0.87
NEK1Q96PY6 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NEK1Q96PY6 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NEK1Q96PY6 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NEK1Q96PY6 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NEK1Q96PY6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.47■□□□□ 0.87
NEK1Q96PY6 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NEK1Q96PY6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
NEK1Q96PY6 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
NEK1Q96PY6 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NEK1Q96PY6 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
NEK1Q96PY6 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NEK1Q96PY6 AC009053.2-201ENST00000563701 2365 ntBASIC20.46■□□□□ 0.87
NEK1Q96PY6 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
NEK1Q96PY6 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC20.46■□□□□ 0.87
NEK1Q96PY6 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NEK1Q96PY6 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NEK1Q96PY6 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NEK1Q96PY6 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NEK1Q96PY6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.46■□□□□ 0.87
NEK1Q96PY6 ACTG1P4-201ENST00000425123 1122 ntBASIC20.46■□□□□ 0.87
NEK1Q96PY6 PRYP5-201ENST00000451909 266 ntBASIC20.46■□□□□ 0.87
NEK1Q96PY6 BX005266.1-201ENST00000473402 457 ntBASIC20.46■□□□□ 0.87
NEK1Q96PY6 MTDHP3-201ENST00000594186 672 ntBASIC20.46■□□□□ 0.87
NEK1Q96PY6 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NEK1Q96PY6 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NEK1Q96PY6 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NEK1Q96PY6 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NEK1Q96PY6 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
NEK1Q96PY6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NEK1Q96PY6 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NEK1Q96PY6 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.46■□□□□ 0.87
NEK1Q96PY6 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.45■□□□□ 0.87
NEK1Q96PY6 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
NEK1Q96PY6 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NEK1Q96PY6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
NEK1Q96PY6 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NEK1Q96PY6 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.45■□□□□ 0.86
NEK1Q96PY6 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NEK1Q96PY6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
NEK1Q96PY6 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NEK1Q96PY6 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
NEK1Q96PY6 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
NEK1Q96PY6 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
NEK1Q96PY6 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NEK1Q96PY6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NEK1Q96PY6 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
NEK1Q96PY6 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NEK1Q96PY6 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NEK1Q96PY6 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
NEK1Q96PY6 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NEK1Q96PY6 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.45■□□□□ 0.86
NEK1Q96PY6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.45■□□□□ 0.86
NEK1Q96PY6 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
NEK1Q96PY6 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
NEK1Q96PY6 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.45■□□□□ 0.86
NEK1Q96PY6 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.45■□□□□ 0.86
NEK1Q96PY6 NKAPP1-205ENST00000585790 367 ntBASIC20.45■□□□□ 0.86
NEK1Q96PY6 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.45■□□□□ 0.86
NEK1Q96PY6 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NEK1Q96PY6 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.45■□□□□ 0.86
NEK1Q96PY6 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NEK1Q96PY6 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NEK1Q96PY6 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
NEK1Q96PY6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NEK1Q96PY6 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NEK1Q96PY6 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.45■□□□□ 0.86
NEK1Q96PY6 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NEK1Q96PY6 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NEK1Q96PY6 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
NEK1Q96PY6 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NEK1Q96PY6 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NEK1Q96PY6 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NEK1Q96PY6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NEK1Q96PY6 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NEK1Q96PY6 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NEK1Q96PY6 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NEK1Q96PY6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NEK1Q96PY6 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms