Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ZNF48Q96MX3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.08□□□□□ -0.15
ZNF48Q96MX3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ZNF48Q96MX3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 CRYGEP-201ENST00000412192 528 ntBASIC14.08□□□□□ -0.16
ZNF48Q96MX3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 RPS15P9-201ENST00000494093 319 ntBASIC14.08□□□□□ -0.16
ZNF48Q96MX3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 AC018845.2-201ENST00000568326 409 ntBASIC14.08□□□□□ -0.16
ZNF48Q96MX3 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 AC092865.6-201ENST00000642101 219 ntBASIC14.08□□□□□ -0.16
ZNF48Q96MX3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ZNF48Q96MX3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 IGHV3-65-201ENST00000523210 341 ntBASIC14.07□□□□□ -0.16
ZNF48Q96MX3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 STK25P1-201ENST00000585406 838 ntBASIC14.07□□□□□ -0.16
ZNF48Q96MX3 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ZNF48Q96MX3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
ZNF48Q96MX3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms