Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PGBD1Q96JS3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.09■□□□□ 0.81
PGBD1Q96JS3 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.09■□□□□ 0.81
PGBD1Q96JS3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PGBD1Q96JS3 AC148477.8-201ENST00000624298 468 ntBASIC20.09■□□□□ 0.81
PGBD1Q96JS3 AC073592.5-201ENST00000624854 528 ntBASIC20.09■□□□□ 0.81
PGBD1Q96JS3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PGBD1Q96JS3 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
PGBD1Q96JS3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PGBD1Q96JS3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.09■□□□□ 0.81
PGBD1Q96JS3 UBALD1-205ENST00000590891 2641 ntBASIC20.09■□□□□ 0.81
PGBD1Q96JS3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PGBD1Q96JS3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PGBD1Q96JS3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PGBD1Q96JS3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PGBD1Q96JS3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PGBD1Q96JS3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PGBD1Q96JS3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PGBD1Q96JS3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.09■□□□□ 0.81
PGBD1Q96JS3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PGBD1Q96JS3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PGBD1Q96JS3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.09■□□□□ 0.81
PGBD1Q96JS3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PGBD1Q96JS3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PGBD1Q96JS3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PGBD1Q96JS3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.08■□□□□ 0.81
PGBD1Q96JS3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.08■□□□□ 0.81
PGBD1Q96JS3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
PGBD1Q96JS3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PGBD1Q96JS3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PGBD1Q96JS3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
PGBD1Q96JS3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PGBD1Q96JS3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PGBD1Q96JS3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PGBD1Q96JS3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC20.08■□□□□ 0.81
PGBD1Q96JS3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PGBD1Q96JS3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PGBD1Q96JS3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PGBD1Q96JS3 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
PGBD1Q96JS3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.08■□□□□ 0.81
PGBD1Q96JS3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.08■□□□□ 0.81
PGBD1Q96JS3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.08■□□□□ 0.81
PGBD1Q96JS3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.81
PGBD1Q96JS3 BX005266.1-201ENST00000473402 457 ntBASIC20.08■□□□□ 0.81
PGBD1Q96JS3 AL160237.2-201ENST00000556165 472 ntBASIC20.08■□□□□ 0.81
PGBD1Q96JS3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.08■□□□□ 0.81
PGBD1Q96JS3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
PGBD1Q96JS3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PGBD1Q96JS3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PGBD1Q96JS3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PGBD1Q96JS3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
PGBD1Q96JS3 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.08■□□□□ 0.8
PGBD1Q96JS3 AC148477.5-201ENST00000625164 1645 ntBASIC20.08■□□□□ 0.8
PGBD1Q96JS3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PGBD1Q96JS3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
PGBD1Q96JS3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
PGBD1Q96JS3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.08■□□□□ 0.8
PGBD1Q96JS3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PGBD1Q96JS3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PGBD1Q96JS3 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.08■□□□□ 0.8
PGBD1Q96JS3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 AL353593.2-201ENST00000602529 1483 ntBASIC20.07■□□□□ 0.8
PGBD1Q96JS3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 AC103564.2-201ENST00000432853 1299 ntBASIC20.07■□□□□ 0.8
PGBD1Q96JS3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 AL139327.4-201ENST00000612362 153 ntBASIC20.07■□□□□ 0.8
PGBD1Q96JS3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PGBD1Q96JS3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms