Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
IFT43Q96FT9 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
IFT43Q96FT9 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
IFT43Q96FT9 LINC00304-203ENST00000565008 1864 ntBASIC17.87■□□□□ 0.45
IFT43Q96FT9 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
IFT43Q96FT9 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
IFT43Q96FT9 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
IFT43Q96FT9 NUS1P2-201ENST00000417358 873 ntBASIC17.87■□□□□ 0.45
IFT43Q96FT9 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
IFT43Q96FT9 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
IFT43Q96FT9 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.87■□□□□ 0.45
IFT43Q96FT9 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
IFT43Q96FT9 SLC25A6P4-201ENST00000586535 553 ntBASIC17.87■□□□□ 0.45
IFT43Q96FT9 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.87■□□□□ 0.45
IFT43Q96FT9 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.87■□□□□ 0.45
IFT43Q96FT9 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.87■□□□□ 0.45
IFT43Q96FT9 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
IFT43Q96FT9 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
IFT43Q96FT9 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
IFT43Q96FT9 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.87■□□□□ 0.45
IFT43Q96FT9 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
IFT43Q96FT9 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.87■□□□□ 0.45
IFT43Q96FT9 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.87■□□□□ 0.45
IFT43Q96FT9 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
IFT43Q96FT9 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
IFT43Q96FT9 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IFT43Q96FT9 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
IFT43Q96FT9 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IFT43Q96FT9 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IFT43Q96FT9 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IFT43Q96FT9 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IFT43Q96FT9 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
IFT43Q96FT9 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.86■□□□□ 0.45
IFT43Q96FT9 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IFT43Q96FT9 AKR1C7P-201ENST00000305623 895 ntBASIC17.86■□□□□ 0.45
IFT43Q96FT9 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IFT43Q96FT9 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
IFT43Q96FT9 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IFT43Q96FT9 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.86■□□□□ 0.45
IFT43Q96FT9 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.86■□□□□ 0.45
IFT43Q96FT9 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.86■□□□□ 0.45
IFT43Q96FT9 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
IFT43Q96FT9 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.86■□□□□ 0.45
IFT43Q96FT9 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.86■□□□□ 0.45
IFT43Q96FT9 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.86■□□□□ 0.45
IFT43Q96FT9 BNIP3P18-201ENST00000593976 575 ntBASIC17.86■□□□□ 0.45
IFT43Q96FT9 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.86■□□□□ 0.45
IFT43Q96FT9 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
IFT43Q96FT9 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
IFT43Q96FT9 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IFT43Q96FT9 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
IFT43Q96FT9 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.86■□□□□ 0.45
IFT43Q96FT9 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.86■□□□□ 0.45
IFT43Q96FT9 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IFT43Q96FT9 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
IFT43Q96FT9 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
IFT43Q96FT9 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IFT43Q96FT9 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
IFT43Q96FT9 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
IFT43Q96FT9 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
IFT43Q96FT9 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
IFT43Q96FT9 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.86■□□□□ 0.45
IFT43Q96FT9 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
IFT43Q96FT9 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
IFT43Q96FT9 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
IFT43Q96FT9 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
IFT43Q96FT9 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
IFT43Q96FT9 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.85■□□□□ 0.45
IFT43Q96FT9 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.85■□□□□ 0.45
IFT43Q96FT9 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.85■□□□□ 0.45
IFT43Q96FT9 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
IFT43Q96FT9 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
IFT43Q96FT9 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
IFT43Q96FT9 FAM220CP-201ENST00000395253 831 ntBASIC17.85■□□□□ 0.45
IFT43Q96FT9 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.85■□□□□ 0.45
IFT43Q96FT9 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.85■□□□□ 0.45
IFT43Q96FT9 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
IFT43Q96FT9 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.85■□□□□ 0.45
IFT43Q96FT9 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
IFT43Q96FT9 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.85■□□□□ 0.45
IFT43Q96FT9 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.85■□□□□ 0.45
IFT43Q96FT9 MIR5100-201ENST00000579544 119 ntBASIC17.85■□□□□ 0.45
IFT43Q96FT9 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
IFT43Q96FT9 AL591684.3-201ENST00000605187 298 ntBASIC17.85■□□□□ 0.45
IFT43Q96FT9 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
IFT43Q96FT9 AC114341.1-201ENST00000618070 349 ntBASIC17.85■□□□□ 0.45
IFT43Q96FT9 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.85■□□□□ 0.45
IFT43Q96FT9 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
IFT43Q96FT9 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
IFT43Q96FT9 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
IFT43Q96FT9 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
IFT43Q96FT9 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
IFT43Q96FT9 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.84■□□□□ 0.45
IFT43Q96FT9 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.84■□□□□ 0.45
IFT43Q96FT9 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IFT43Q96FT9 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IFT43Q96FT9 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.84■□□□□ 0.45
IFT43Q96FT9 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
IFT43Q96FT9 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IFT43Q96FT9 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms