Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.31■□□□□ 0.36
SIPA1Q96FS4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.31■□□□□ 0.36
SIPA1Q96FS4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.31■□□□□ 0.36
SIPA1Q96FS4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.31■□□□□ 0.36
SIPA1Q96FS4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIPA1Q96FS4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIPA1Q96FS4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SIPA1Q96FS4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.31■□□□□ 0.36
SIPA1Q96FS4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.31■□□□□ 0.36
SIPA1Q96FS4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SIPA1Q96FS4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIPA1Q96FS4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIPA1Q96FS4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.31■□□□□ 0.36
SIPA1Q96FS4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SIPA1Q96FS4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.3■□□□□ 0.36
SIPA1Q96FS4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIPA1Q96FS4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SIPA1Q96FS4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIPA1Q96FS4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.3■□□□□ 0.36
SIPA1Q96FS4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIPA1Q96FS4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIPA1Q96FS4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIPA1Q96FS4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SIPA1Q96FS4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIPA1Q96FS4 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.3■□□□□ 0.36
SIPA1Q96FS4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SIPA1Q96FS4 FAM185BP-201ENST00000443595 716 ntBASIC17.3■□□□□ 0.36
SIPA1Q96FS4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.3■□□□□ 0.36
SIPA1Q96FS4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.3■□□□□ 0.36
SIPA1Q96FS4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.3■□□□□ 0.36
SIPA1Q96FS4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.3■□□□□ 0.36
SIPA1Q96FS4 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.3■□□□□ 0.36
SIPA1Q96FS4 AC091812.2-201ENST00000619081 385 ntBASIC17.3■□□□□ 0.36
SIPA1Q96FS4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIPA1Q96FS4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.3■□□□□ 0.36
SIPA1Q96FS4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIPA1Q96FS4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIPA1Q96FS4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.3■□□□□ 0.36
SIPA1Q96FS4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SIPA1Q96FS4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.3■□□□□ 0.36
SIPA1Q96FS4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SIPA1Q96FS4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SIPA1Q96FS4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 AL513480.1-201ENST00000451731 511 ntBASIC17.29■□□□□ 0.36
SIPA1Q96FS4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SIPA1Q96FS4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIPA1Q96FS4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SIPA1Q96FS4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.28■□□□□ 0.36
SIPA1Q96FS4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
SIPA1Q96FS4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIPA1Q96FS4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.28■□□□□ 0.36
SIPA1Q96FS4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIPA1Q96FS4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.28■□□□□ 0.36
SIPA1Q96FS4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SIPA1Q96FS4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SIPA1Q96FS4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SIPA1Q96FS4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.28■□□□□ 0.36
SIPA1Q96FS4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.28■□□□□ 0.36
SIPA1Q96FS4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.28■□□□□ 0.36
SIPA1Q96FS4 PAWRP1-201ENST00000451083 565 ntBASIC17.28■□□□□ 0.36
SIPA1Q96FS4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.28■□□□□ 0.36
SIPA1Q96FS4 AP002472.1-201ENST00000577490 586 ntBASIC17.28■□□□□ 0.36
SIPA1Q96FS4 AC068137.2-201ENST00000605408 478 ntBASIC17.28■□□□□ 0.36
SIPA1Q96FS4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms