Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.02■□□□□ 0.8
CDCA5Q96FF9 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDCA5Q96FF9 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDCA5Q96FF9 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
CDCA5Q96FF9 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CDCA5Q96FF9 RNU1-129P-201ENST00000384064 167 ntBASIC20.02■□□□□ 0.8
CDCA5Q96FF9 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC20.02■□□□□ 0.8
CDCA5Q96FF9 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC20.02■□□□□ 0.8
CDCA5Q96FF9 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC20.02■□□□□ 0.8
CDCA5Q96FF9 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDCA5Q96FF9 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC20.02■□□□□ 0.8
CDCA5Q96FF9 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC20.02■□□□□ 0.8
CDCA5Q96FF9 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CDCA5Q96FF9 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CDCA5Q96FF9 U1.21-201ENST00000580816 167 ntBASIC20.02■□□□□ 0.8
CDCA5Q96FF9 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC20.02■□□□□ 0.8
CDCA5Q96FF9 AL031055.1-201ENST00000606362 631 ntBASIC20.02■□□□□ 0.8
CDCA5Q96FF9 AL353732.1-201ENST00000569618 1459 ntBASIC20.02■□□□□ 0.8
CDCA5Q96FF9 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.02■□□□□ 0.8
CDCA5Q96FF9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDCA5Q96FF9 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.02■□□□□ 0.8
CDCA5Q96FF9 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDCA5Q96FF9 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDCA5Q96FF9 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDCA5Q96FF9 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CDCA5Q96FF9 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.02■□□□□ 0.79
CDCA5Q96FF9 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.02■□□□□ 0.79
CDCA5Q96FF9 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CDCA5Q96FF9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CDCA5Q96FF9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDCA5Q96FF9 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20.01■□□□□ 0.79
CDCA5Q96FF9 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDCA5Q96FF9 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC20.01■□□□□ 0.79
CDCA5Q96FF9 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC20.01■□□□□ 0.79
CDCA5Q96FF9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDCA5Q96FF9 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDCA5Q96FF9 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDCA5Q96FF9 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDCA5Q96FF9 HNRNPA3P1-201ENST00000401429 1139 ntBASIC20.01■□□□□ 0.79
CDCA5Q96FF9 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDCA5Q96FF9 HNRNPA3P5-201ENST00000455201 833 ntBASIC20.01■□□□□ 0.79
CDCA5Q96FF9 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC20.01■□□□□ 0.79
CDCA5Q96FF9 MTRF1LP2-201ENST00000506027 1122 ntBASIC20.01■□□□□ 0.79
CDCA5Q96FF9 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDCA5Q96FF9 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC20.01■□□□□ 0.79
CDCA5Q96FF9 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC20.01■□□□□ 0.79
CDCA5Q96FF9 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC20.01■□□□□ 0.79
CDCA5Q96FF9 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDCA5Q96FF9 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.01■□□□□ 0.79
CDCA5Q96FF9 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.01■□□□□ 0.79
CDCA5Q96FF9 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDCA5Q96FF9 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.01■□□□□ 0.79
CDCA5Q96FF9 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDCA5Q96FF9 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDCA5Q96FF9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20■□□□□ 0.79
CDCA5Q96FF9 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20■□□□□ 0.79
CDCA5Q96FF9 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDCA5Q96FF9 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDCA5Q96FF9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDCA5Q96FF9 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDCA5Q96FF9 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDCA5Q96FF9 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDCA5Q96FF9 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC20■□□□□ 0.79
CDCA5Q96FF9 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDCA5Q96FF9 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20■□□□□ 0.79
CDCA5Q96FF9 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CDCA5Q96FF9 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDCA5Q96FF9 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CDCA5Q96FF9 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDCA5Q96FF9 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDCA5Q96FF9 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CDCA5Q96FF9 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC20■□□□□ 0.79
CDCA5Q96FF9 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC20■□□□□ 0.79
CDCA5Q96FF9 AL138918.1-201ENST00000568306 659 ntBASIC20■□□□□ 0.79
CDCA5Q96FF9 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20■□□□□ 0.79
CDCA5Q96FF9 SSH2-210ENST00000582084 560 ntTSL 3 BASIC20■□□□□ 0.79
CDCA5Q96FF9 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CDCA5Q96FF9 NKG7-205ENST00000600427 520 ntTSL 3 BASIC20■□□□□ 0.79
CDCA5Q96FF9 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDCA5Q96FF9 AL138828.2-201ENST00000615812 383 ntBASIC20■□□□□ 0.79
CDCA5Q96FF9 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
CDCA5Q96FF9 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CDCA5Q96FF9 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
CDCA5Q96FF9 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDCA5Q96FF9 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDCA5Q96FF9 AC016027.1-202ENST00000607927 1699 ntBASIC20■□□□□ 0.79
CDCA5Q96FF9 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20■□□□□ 0.79
CDCA5Q96FF9 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDCA5Q96FF9 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDCA5Q96FF9 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20■□□□□ 0.79
CDCA5Q96FF9 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.99■□□□□ 0.79
CDCA5Q96FF9 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.99■□□□□ 0.79
CDCA5Q96FF9 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDCA5Q96FF9 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDCA5Q96FF9 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CDCA5Q96FF9 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC19.99■□□□□ 0.79
CDCA5Q96FF9 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CDCA5Q96FF9 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDCA5Q96FF9 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDCA5Q96FF9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms