Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 AC027369.6-201ENST00000525520 931 ntBASIC17.11■□□□□ 0.33
CLDN23Q96B33 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDN23Q96B33 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN23Q96B33 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN23Q96B33 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.11■□□□□ 0.33
CLDN23Q96B33 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.11■□□□□ 0.33
CLDN23Q96B33 MIR3909-201ENST00000579518 119 ntBASIC17.11■□□□□ 0.33
CLDN23Q96B33 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.11■□□□□ 0.33
CLDN23Q96B33 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN23Q96B33 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDN23Q96B33 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN23Q96B33 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLDN23Q96B33 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN23Q96B33 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN23Q96B33 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN23Q96B33 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CLDN23Q96B33 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN23Q96B33 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLDN23Q96B33 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.1■□□□□ 0.33
CLDN23Q96B33 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CLDN23Q96B33 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN23Q96B33 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN23Q96B33 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.1■□□□□ 0.33
CLDN23Q96B33 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN23Q96B33 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLDN23Q96B33 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLDN23Q96B33 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN23Q96B33 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.1■□□□□ 0.33
CLDN23Q96B33 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CLDN23Q96B33 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLDN23Q96B33 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN23Q96B33 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN23Q96B33 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.1■□□□□ 0.33
CLDN23Q96B33 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN23Q96B33 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.1■□□□□ 0.33
CLDN23Q96B33 SPTLC1P1-201ENST00000447199 261 ntBASIC17.1■□□□□ 0.33
CLDN23Q96B33 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.1■□□□□ 0.33
CLDN23Q96B33 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.1■□□□□ 0.33
CLDN23Q96B33 LINC01451-201ENST00000623792 534 ntBASIC17.1■□□□□ 0.33
CLDN23Q96B33 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN23Q96B33 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN23Q96B33 CU639417.3-201ENST00000624240 1404 ntBASIC17.1■□□□□ 0.33
CLDN23Q96B33 FLJ13224-201ENST00000313737 1514 ntBASIC17.1■□□□□ 0.33
CLDN23Q96B33 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN23Q96B33 AC022144.1-201ENST00000602255 1580 ntBASIC17.1■□□□□ 0.33
CLDN23Q96B33 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN23Q96B33 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN23Q96B33 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN23Q96B33 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN23Q96B33 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.1■□□□□ 0.33
CLDN23Q96B33 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLDN23Q96B33 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.09■□□□□ 0.33
CLDN23Q96B33 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN23Q96B33 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN23Q96B33 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN23Q96B33 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN23Q96B33 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
CLDN23Q96B33 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CLDN23Q96B33 RNU1-129P-201ENST00000384064 167 ntBASIC17.09■□□□□ 0.33
CLDN23Q96B33 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.09■□□□□ 0.33
CLDN23Q96B33 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CLDN23Q96B33 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.09■□□□□ 0.33
CLDN23Q96B33 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN23Q96B33 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN23Q96B33 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.09■□□□□ 0.33
CLDN23Q96B33 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.09■□□□□ 0.33
CLDN23Q96B33 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.09■□□□□ 0.33
CLDN23Q96B33 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN23Q96B33 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CLDN23Q96B33 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.09■□□□□ 0.33
CLDN23Q96B33 U1.21-201ENST00000580816 167 ntBASIC17.09■□□□□ 0.33
CLDN23Q96B33 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.09■□□□□ 0.33
CLDN23Q96B33 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.09■□□□□ 0.33
CLDN23Q96B33 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.09■□□□□ 0.33
CLDN23Q96B33 AC004233.3-201ENST00000607794 1269 ntBASIC17.09■□□□□ 0.33
CLDN23Q96B33 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN23Q96B33 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.09■□□□□ 0.33
CLDN23Q96B33 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN23Q96B33 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN23Q96B33 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN23Q96B33 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CLDN23Q96B33 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CLDN23Q96B33 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN23Q96B33 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.09■□□□□ 0.33
CLDN23Q96B33 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLDN23Q96B33 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN23Q96B33 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN23Q96B33 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN23Q96B33 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN23Q96B33 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.08■□□□□ 0.33
CLDN23Q96B33 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN23Q96B33 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN23Q96B33 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLDN23Q96B33 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.08■□□□□ 0.33
CLDN23Q96B33 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.08■□□□□ 0.33
CLDN23Q96B33 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.08■□□□□ 0.33
CLDN23Q96B33 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.08■□□□□ 0.32
CLDN23Q96B33 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.08■□□□□ 0.32
CLDN23Q96B33 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN23Q96B33 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms