Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 AC024563.2-201ENST00000603282 481 ntBASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 AC116562.4-202ENST00000641738 218 ntBASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CKAP2Q8WWK9 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 EGFEM1P-202ENST00000431685 1563 ntBASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 AL158047.1-201ENST00000445918 881 ntBASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 AC142381.4-202ENST00000563973 229 ntBASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CKAP2Q8WWK9 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 ALOX12P2-203ENST00000570921 1945 ntBASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 AC096633.1-201ENST00000422446 749 ntBASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 AC009947.2-201ENST00000444014 672 ntBASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 AC010653.2-201ENST00000623505 997 ntBASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms