Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SNIP1Q8TAD8 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNIP1Q8TAD8 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.28■□□□□ 0.2
SNIP1Q8TAD8 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SNIP1Q8TAD8 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNIP1Q8TAD8 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNIP1Q8TAD8 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
SNIP1Q8TAD8 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNIP1Q8TAD8 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNIP1Q8TAD8 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SNIP1Q8TAD8 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNIP1Q8TAD8 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SNIP1Q8TAD8 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNIP1Q8TAD8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNIP1Q8TAD8 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.28■□□□□ 0.2
SNIP1Q8TAD8 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.28■□□□□ 0.2
SNIP1Q8TAD8 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.28■□□□□ 0.2
SNIP1Q8TAD8 AC107890.1-201ENST00000422478 521 ntBASIC16.28■□□□□ 0.2
SNIP1Q8TAD8 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.28■□□□□ 0.2
SNIP1Q8TAD8 AL671277.1-201ENST00000429656 993 ntBASIC16.28■□□□□ 0.2
SNIP1Q8TAD8 AC007274.1-201ENST00000439805 662 ntBASIC16.28■□□□□ 0.2
SNIP1Q8TAD8 KRT8P48-201ENST00000515599 1220 ntBASIC16.28■□□□□ 0.2
SNIP1Q8TAD8 IGHV3-52-201ENST00000519770 353 ntBASIC16.28■□□□□ 0.2
SNIP1Q8TAD8 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.28■□□□□ 0.2
SNIP1Q8TAD8 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.28■□□□□ 0.2
SNIP1Q8TAD8 ACTL9-202ENST00000612068 1252 ntBASIC16.28■□□□□ 0.2
SNIP1Q8TAD8 AC008761.3-201ENST00000624803 892 ntBASIC16.28■□□□□ 0.2
SNIP1Q8TAD8 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
SNIP1Q8TAD8 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNIP1Q8TAD8 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SNIP1Q8TAD8 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNIP1Q8TAD8 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.28■□□□□ 0.2
SNIP1Q8TAD8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNIP1Q8TAD8 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.28■□□□□ 0.2
SNIP1Q8TAD8 ANO7L1-203ENST00000602586 1720 ntBASIC16.28■□□□□ 0.2
SNIP1Q8TAD8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.27■□□□□ 0.2
SNIP1Q8TAD8 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNIP1Q8TAD8 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNIP1Q8TAD8 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNIP1Q8TAD8 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.27■□□□□ 0.2
SNIP1Q8TAD8 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
SNIP1Q8TAD8 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
SNIP1Q8TAD8 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNIP1Q8TAD8 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SNIP1Q8TAD8 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SNIP1Q8TAD8 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.27■□□□□ 0.2
SNIP1Q8TAD8 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SNIP1Q8TAD8 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SNIP1Q8TAD8 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNIP1Q8TAD8 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNIP1Q8TAD8 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNIP1Q8TAD8 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNIP1Q8TAD8 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNIP1Q8TAD8 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SNIP1Q8TAD8 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.27■□□□□ 0.2
SNIP1Q8TAD8 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.27■□□□□ 0.2
SNIP1Q8TAD8 KRT18P32-201ENST00000424695 1287 ntBASIC16.27■□□□□ 0.2
SNIP1Q8TAD8 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SNIP1Q8TAD8 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.27■□□□□ 0.2
SNIP1Q8TAD8 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SNIP1Q8TAD8 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC16.27■□□□□ 0.2
SNIP1Q8TAD8 DUX4L17-201ENST00000557360 1267 ntBASIC16.27■□□□□ 0.2
SNIP1Q8TAD8 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.27■□□□□ 0.2
SNIP1Q8TAD8 RN7SL602P-201ENST00000578326 324 ntBASIC16.27■□□□□ 0.2
SNIP1Q8TAD8 AC099522.2-201ENST00000607001 744 ntBASIC16.27■□□□□ 0.2
SNIP1Q8TAD8 AL358472.5-202ENST00000641448 1267 ntBASIC16.27■□□□□ 0.2
SNIP1Q8TAD8 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.27■□□□□ 0.2
SNIP1Q8TAD8 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.27■□□□□ 0.2
SNIP1Q8TAD8 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SNIP1Q8TAD8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.27■□□□□ 0.2
SNIP1Q8TAD8 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SNIP1Q8TAD8 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
SNIP1Q8TAD8 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SNIP1Q8TAD8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
SNIP1Q8TAD8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SNIP1Q8TAD8 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SNIP1Q8TAD8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SNIP1Q8TAD8 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
SNIP1Q8TAD8 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.27■□□□□ 0.19
SNIP1Q8TAD8 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.27■□□□□ 0.19
SNIP1Q8TAD8 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.27■□□□□ 0.19
SNIP1Q8TAD8 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SNIP1Q8TAD8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
SNIP1Q8TAD8 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SNIP1Q8TAD8 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SNIP1Q8TAD8 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.26■□□□□ 0.19
SNIP1Q8TAD8 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SNIP1Q8TAD8 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SNIP1Q8TAD8 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SNIP1Q8TAD8 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SNIP1Q8TAD8 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SNIP1Q8TAD8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SNIP1Q8TAD8 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
SNIP1Q8TAD8 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SNIP1Q8TAD8 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SNIP1Q8TAD8 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SNIP1Q8TAD8 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.26■□□□□ 0.19
SNIP1Q8TAD8 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
SNIP1Q8TAD8 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.26■□□□□ 0.19
SNIP1Q8TAD8 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms