Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.75□□□□□ -0.05
CLDND2Q8NHS1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDND2Q8NHS1 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CLDND2Q8NHS1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLDND2Q8NHS1 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.75□□□□□ -0.05
CLDND2Q8NHS1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDND2Q8NHS1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLDND2Q8NHS1 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDND2Q8NHS1 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDND2Q8NHS1 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 ZNF259P1-201ENST00000407656 1365 ntBASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 AC018695.7-201ENST00000624587 2492 ntBASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 AC011676.5-201ENST00000624864 2660 ntBASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 BX005266.1-201ENST00000473402 457 ntBASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 AC092910.1-201ENST00000482027 1129 ntBASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 GPALPP1-207ENST00000611650 899 ntBASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 AC117500.6-201ENST00000624871 588 ntBASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 AC022211.2-201ENST00000585075 2527 ntBASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 AC093677.2-201ENST00000600169 1863 ntBASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 AL118508.1-201ENST00000613502 2345 ntBASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 AC079776.2-201ENST00000641154 1609 ntBASIC14.74□□□□□ -0.05
CLDND2Q8NHS1 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 PMPCAP1-201ENST00000508114 1576 ntBASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 AC046158.3-201ENST00000624947 2558 ntBASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 POLD2P1-201ENST00000511220 997 ntBASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 AC012640.2-201ENST00000561606 901 ntBASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 PKD1P1-201ENST00000458669 6805 ntBASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.73□□□□□ -0.05
CLDND2Q8NHS1 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDND2Q8NHS1 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDND2Q8NHS1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CLDND2Q8NHS1 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CLDND2Q8NHS1 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.72□□□□□ -0.05
CLDND2Q8NHS1 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.72□□□□□ -0.05
CLDND2Q8NHS1 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.72□□□□□ -0.05
CLDND2Q8NHS1 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms