Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.28■□□□□ 0.2
ARHGEF39Q8N4T4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ARHGEF39Q8N4T4 AC004790.2-201ENST00000623588 572 ntBASIC16.28■□□□□ 0.2
ARHGEF39Q8N4T4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARHGEF39Q8N4T4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
ARHGEF39Q8N4T4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
ARHGEF39Q8N4T4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARHGEF39Q8N4T4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.28■□□□□ 0.2
ARHGEF39Q8N4T4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ARHGEF39Q8N4T4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.28■□□□□ 0.2
ARHGEF39Q8N4T4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ARHGEF39Q8N4T4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ARHGEF39Q8N4T4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ARHGEF39Q8N4T4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.28■□□□□ 0.2
ARHGEF39Q8N4T4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ARHGEF39Q8N4T4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARHGEF39Q8N4T4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
ARHGEF39Q8N4T4 AC139713.2-201ENST00000641328 2723 ntBASIC16.27■□□□□ 0.2
ARHGEF39Q8N4T4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARHGEF39Q8N4T4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARHGEF39Q8N4T4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARHGEF39Q8N4T4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARHGEF39Q8N4T4 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARHGEF39Q8N4T4 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARHGEF39Q8N4T4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARHGEF39Q8N4T4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARHGEF39Q8N4T4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ARHGEF39Q8N4T4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.27■□□□□ 0.2
ARHGEF39Q8N4T4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
ARHGEF39Q8N4T4 DUX4L17-201ENST00000557360 1267 ntBASIC16.27■□□□□ 0.2
ARHGEF39Q8N4T4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.27■□□□□ 0.2
ARHGEF39Q8N4T4 GGTLC5P-201ENST00000617623 998 ntBASIC16.27■□□□□ 0.2
ARHGEF39Q8N4T4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
ARHGEF39Q8N4T4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
ARHGEF39Q8N4T4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
ARHGEF39Q8N4T4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
ARHGEF39Q8N4T4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
ARHGEF39Q8N4T4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ARHGEF39Q8N4T4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
ARHGEF39Q8N4T4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
ARHGEF39Q8N4T4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ARHGEF39Q8N4T4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
ARHGEF39Q8N4T4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ARHGEF39Q8N4T4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF39Q8N4T4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF39Q8N4T4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF39Q8N4T4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF39Q8N4T4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF39Q8N4T4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
ARHGEF39Q8N4T4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.26■□□□□ 0.19
ARHGEF39Q8N4T4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.26■□□□□ 0.19
ARHGEF39Q8N4T4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF39Q8N4T4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.26■□□□□ 0.19
ARHGEF39Q8N4T4 PI4KAP1-204ENST00000612579 1703 ntBASIC16.26■□□□□ 0.19
ARHGEF39Q8N4T4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.26■□□□□ 0.19
ARHGEF39Q8N4T4 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.26■□□□□ 0.19
ARHGEF39Q8N4T4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF39Q8N4T4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF39Q8N4T4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.26■□□□□ 0.19
ARHGEF39Q8N4T4 IGLL3P-201ENST00000412472 434 ntBASIC16.26■□□□□ 0.19
ARHGEF39Q8N4T4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.26■□□□□ 0.19
ARHGEF39Q8N4T4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF39Q8N4T4 PMS2P1-201ENST00000431037 1228 ntBASIC16.26■□□□□ 0.19
ARHGEF39Q8N4T4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.26■□□□□ 0.19
ARHGEF39Q8N4T4 HCG4B-203ENST00000450128 991 ntBASIC16.26■□□□□ 0.19
ARHGEF39Q8N4T4 SLC25A6P2-201ENST00000497974 877 ntBASIC16.26■□□□□ 0.19
ARHGEF39Q8N4T4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
ARHGEF39Q8N4T4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF39Q8N4T4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.26■□□□□ 0.19
ARHGEF39Q8N4T4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF39Q8N4T4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ARHGEF39Q8N4T4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ARHGEF39Q8N4T4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF39Q8N4T4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF39Q8N4T4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.26■□□□□ 0.19
ARHGEF39Q8N4T4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ARHGEF39Q8N4T4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.26■□□□□ 0.19
ARHGEF39Q8N4T4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
ARHGEF39Q8N4T4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF39Q8N4T4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF39Q8N4T4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ARHGEF39Q8N4T4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF39Q8N4T4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF39Q8N4T4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF39Q8N4T4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
ARHGEF39Q8N4T4 AL645608.8-201ENST00000606034 2086 ntBASIC16.25■□□□□ 0.19
ARHGEF39Q8N4T4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF39Q8N4T4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF39Q8N4T4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.25■□□□□ 0.19
ARHGEF39Q8N4T4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.25■□□□□ 0.19
ARHGEF39Q8N4T4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ARHGEF39Q8N4T4 VN2R19P-201ENST00000442399 1052 ntBASIC16.25■□□□□ 0.19
ARHGEF39Q8N4T4 AC087163.2-201ENST00000457299 853 ntBASIC16.25■□□□□ 0.19
ARHGEF39Q8N4T4 PGAM5P1-201ENST00000518923 814 ntBASIC16.25■□□□□ 0.19
ARHGEF39Q8N4T4 KRT18P58-201ENST00000527480 1120 ntBASIC16.25■□□□□ 0.19
ARHGEF39Q8N4T4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.25■□□□□ 0.19
ARHGEF39Q8N4T4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
ARHGEF39Q8N4T4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.25■□□□□ 0.19
ARHGEF39Q8N4T4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.25■□□□□ 0.19
ARHGEF39Q8N4T4 AC140113.2-201ENST00000604370 208 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms