Protein–RNA interactions for Protein: Q8N4B4

FBXO39, F-box only protein 39, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO39Q8N4B4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
FBXO39Q8N4B4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.32■□□□□ 0.36
FBXO39Q8N4B4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 MTDHP3-201ENST00000594186 672 ntBASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 AL355877.3-201ENST00000622820 899 ntBASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 PCDHA12-202ENST00000613593 2588 ntBASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
FBXO39Q8N4B4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FBXO39Q8N4B4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
FBXO39Q8N4B4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FBXO39Q8N4B4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
FBXO39Q8N4B4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
FBXO39Q8N4B4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
FBXO39Q8N4B4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FBXO39Q8N4B4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.3■□□□□ 0.36
FBXO39Q8N4B4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.3■□□□□ 0.36
FBXO39Q8N4B4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FBXO39Q8N4B4 SCARNA2-201ENST00000458748 420 ntBASIC17.3■□□□□ 0.36
FBXO39Q8N4B4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.3■□□□□ 0.36
FBXO39Q8N4B4 AC009533.2-201ENST00000543664 586 ntBASIC17.3■□□□□ 0.36
FBXO39Q8N4B4 AC106730.1-201ENST00000566722 1090 ntBASIC17.3■□□□□ 0.36
FBXO39Q8N4B4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FBXO39Q8N4B4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.3■□□□□ 0.36
FBXO39Q8N4B4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FBXO39Q8N4B4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.3■□□□□ 0.36
FBXO39Q8N4B4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.3■□□□□ 0.36
FBXO39Q8N4B4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.3■□□□□ 0.36
FBXO39Q8N4B4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.3■□□□□ 0.36
FBXO39Q8N4B4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.3■□□□□ 0.36
FBXO39Q8N4B4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
FBXO39Q8N4B4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FBXO39Q8N4B4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.3■□□□□ 0.36
FBXO39Q8N4B4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
FBXO39Q8N4B4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FBXO39Q8N4B4 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FBXO39Q8N4B4 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
FBXO39Q8N4B4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FBXO39Q8N4B4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.3■□□□□ 0.36
FBXO39Q8N4B4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
FBXO39Q8N4B4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
FBXO39Q8N4B4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FBXO39Q8N4B4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FBXO39Q8N4B4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FBXO39Q8N4B4 AC243591.1-201ENST00000452967 1364 ntBASIC17.29■□□□□ 0.36
FBXO39Q8N4B4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
FBXO39Q8N4B4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FBXO39Q8N4B4 AC009053.2-201ENST00000563701 2365 ntBASIC17.29■□□□□ 0.36
FBXO39Q8N4B4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FBXO39Q8N4B4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.29■□□□□ 0.36
FBXO39Q8N4B4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.29■□□□□ 0.36
FBXO39Q8N4B4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FBXO39Q8N4B4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
FBXO39Q8N4B4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
FBXO39Q8N4B4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FBXO39Q8N4B4 RPS2P28-201ENST00000314255 741 ntBASIC17.29■□□□□ 0.36
FBXO39Q8N4B4 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
FBXO39Q8N4B4 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.29■□□□□ 0.36
FBXO39Q8N4B4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FBXO39Q8N4B4 RBM17P3-201ENST00000417687 1192 ntBASIC17.29■□□□□ 0.36
FBXO39Q8N4B4 AC005104.2-201ENST00000427818 678 ntBASIC17.29■□□□□ 0.36
FBXO39Q8N4B4 AC018712.1-201ENST00000455767 687 ntBASIC17.29■□□□□ 0.36
FBXO39Q8N4B4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms