Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC65Q8IXS2 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC65Q8IXS2 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC65Q8IXS2 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC65Q8IXS2 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC65Q8IXS2 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCDC65Q8IXS2 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC65Q8IXS2 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC65Q8IXS2 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC65Q8IXS2 AC080080.1-201ENST00000625121 2420 ntBASIC19.21■□□□□ 0.67
CCDC65Q8IXS2 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC65Q8IXS2 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC65Q8IXS2 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCDC65Q8IXS2 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC65Q8IXS2 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC65Q8IXS2 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCDC65Q8IXS2 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC65Q8IXS2 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC65Q8IXS2 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC65Q8IXS2 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC65Q8IXS2 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CCDC65Q8IXS2 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC65Q8IXS2 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC65Q8IXS2 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC65Q8IXS2 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC65Q8IXS2 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC65Q8IXS2 KRT18P56-201ENST00000507275 550 ntBASIC19.2■□□□□ 0.66
CCDC65Q8IXS2 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC65Q8IXS2 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC65Q8IXS2 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC65Q8IXS2 CLEC4GP1-201ENST00000596555 870 ntBASIC19.2■□□□□ 0.66
CCDC65Q8IXS2 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC65Q8IXS2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC65Q8IXS2 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC65Q8IXS2 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC65Q8IXS2 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC65Q8IXS2 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC65Q8IXS2 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC65Q8IXS2 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC65Q8IXS2 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC65Q8IXS2 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCDC65Q8IXS2 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC65Q8IXS2 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC65Q8IXS2 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
CCDC65Q8IXS2 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CCDC65Q8IXS2 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC65Q8IXS2 EGFEM1P-202ENST00000431685 1563 ntBASIC19.19■□□□□ 0.66
CCDC65Q8IXS2 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC65Q8IXS2 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC65Q8IXS2 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
CCDC65Q8IXS2 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC65Q8IXS2 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC65Q8IXS2 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC65Q8IXS2 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC65Q8IXS2 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CCDC65Q8IXS2 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC65Q8IXS2 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC65Q8IXS2 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC65Q8IXS2 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC65Q8IXS2 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC65Q8IXS2 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC65Q8IXS2 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC65Q8IXS2 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC65Q8IXS2 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC65Q8IXS2 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC65Q8IXS2 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC65Q8IXS2 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC65Q8IXS2 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC65Q8IXS2 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC65Q8IXS2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.19■□□□□ 0.66
CCDC65Q8IXS2 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC65Q8IXS2 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.19■□□□□ 0.66
CCDC65Q8IXS2 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC65Q8IXS2 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC65Q8IXS2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC65Q8IXS2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC65Q8IXS2 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC65Q8IXS2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC65Q8IXS2 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC65Q8IXS2 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC65Q8IXS2 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC65Q8IXS2 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC65Q8IXS2 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC65Q8IXS2 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC65Q8IXS2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC65Q8IXS2 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC65Q8IXS2 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC65Q8IXS2 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC65Q8IXS2 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC65Q8IXS2 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC65Q8IXS2 ACTG1P4-201ENST00000425123 1122 ntBASIC19.18■□□□□ 0.66
CCDC65Q8IXS2 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC65Q8IXS2 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC65Q8IXS2 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC65Q8IXS2 MTDHP3-201ENST00000594186 672 ntBASIC19.18■□□□□ 0.66
CCDC65Q8IXS2 AC012313.10-201ENST00000623509 926 ntBASIC19.18■□□□□ 0.66
CCDC65Q8IXS2 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC65Q8IXS2 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC65Q8IXS2 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC65Q8IXS2 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms