Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
APLFQ8IW19 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
APLFQ8IW19 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
APLFQ8IW19 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
APLFQ8IW19 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.22■□□□□ 0.35
APLFQ8IW19 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
APLFQ8IW19 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
APLFQ8IW19 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
APLFQ8IW19 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
APLFQ8IW19 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.22■□□□□ 0.35
APLFQ8IW19 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
APLFQ8IW19 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.22■□□□□ 0.35
APLFQ8IW19 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.22■□□□□ 0.35
APLFQ8IW19 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.22■□□□□ 0.35
APLFQ8IW19 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.22■□□□□ 0.35
APLFQ8IW19 AL031008.1-201ENST00000619963 541 ntBASIC17.22■□□□□ 0.35
APLFQ8IW19 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.22■□□□□ 0.35
APLFQ8IW19 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.22■□□□□ 0.35
APLFQ8IW19 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
APLFQ8IW19 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.22■□□□□ 0.35
APLFQ8IW19 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
APLFQ8IW19 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.22■□□□□ 0.35
APLFQ8IW19 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
APLFQ8IW19 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.22■□□□□ 0.35
APLFQ8IW19 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
APLFQ8IW19 OR6D1P-203ENST00000641209 4860 ntBASIC17.22■□□□□ 0.35
APLFQ8IW19 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
APLFQ8IW19 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
APLFQ8IW19 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
APLFQ8IW19 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.22■□□□□ 0.35
APLFQ8IW19 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.22■□□□□ 0.35
APLFQ8IW19 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APLFQ8IW19 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.21■□□□□ 0.35
APLFQ8IW19 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.21■□□□□ 0.35
APLFQ8IW19 AC008556.1-201ENST00000610908 2040 ntBASIC17.21■□□□□ 0.35
APLFQ8IW19 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.21■□□□□ 0.35
APLFQ8IW19 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APLFQ8IW19 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
APLFQ8IW19 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
APLFQ8IW19 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.21■□□□□ 0.35
APLFQ8IW19 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.21■□□□□ 0.35
APLFQ8IW19 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APLFQ8IW19 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APLFQ8IW19 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APLFQ8IW19 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
APLFQ8IW19 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
APLFQ8IW19 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APLFQ8IW19 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
APLFQ8IW19 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APLFQ8IW19 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
APLFQ8IW19 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APLFQ8IW19 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
APLFQ8IW19 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.21■□□□□ 0.35
APLFQ8IW19 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
APLFQ8IW19 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
APLFQ8IW19 MIR564-202ENST00000385049 94 ntBASIC17.21■□□□□ 0.35
APLFQ8IW19 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.21■□□□□ 0.35
APLFQ8IW19 AP003733.1-201ENST00000491725 852 ntBASIC17.21■□□□□ 0.35
APLFQ8IW19 AC104819.1-201ENST00000504587 486 ntBASIC17.21■□□□□ 0.35
APLFQ8IW19 FOSL1P1-201ENST00000511041 816 ntBASIC17.21■□□□□ 0.35
APLFQ8IW19 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.21■□□□□ 0.35
APLFQ8IW19 AC005332.3-201ENST00000589904 676 ntBASIC17.21■□□□□ 0.35
APLFQ8IW19 AL390719.2-201ENST00000606993 987 ntBASIC17.21■□□□□ 0.35
APLFQ8IW19 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
APLFQ8IW19 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
APLFQ8IW19 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
APLFQ8IW19 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.21■□□□□ 0.34
APLFQ8IW19 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
APLFQ8IW19 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
APLFQ8IW19 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
APLFQ8IW19 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
APLFQ8IW19 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
APLFQ8IW19 AL136379.1-201ENST00000623471 2642 ntBASIC17.2■□□□□ 0.34
APLFQ8IW19 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
APLFQ8IW19 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
APLFQ8IW19 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.2■□□□□ 0.34
APLFQ8IW19 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
APLFQ8IW19 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
APLFQ8IW19 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
APLFQ8IW19 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
APLFQ8IW19 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
APLFQ8IW19 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.2■□□□□ 0.34
APLFQ8IW19 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
APLFQ8IW19 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
APLFQ8IW19 AP000347.1-202ENST00000435868 847 ntBASIC17.2■□□□□ 0.34
APLFQ8IW19 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.2■□□□□ 0.34
APLFQ8IW19 AC009078.2-202ENST00000463353 338 ntBASIC17.2■□□□□ 0.34
APLFQ8IW19 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
APLFQ8IW19 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.2■□□□□ 0.34
APLFQ8IW19 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.2■□□□□ 0.34
APLFQ8IW19 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
APLFQ8IW19 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.2■□□□□ 0.34
APLFQ8IW19 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
APLFQ8IW19 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
APLFQ8IW19 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
APLFQ8IW19 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
APLFQ8IW19 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.2■□□□□ 0.34
APLFQ8IW19 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
APLFQ8IW19 REXO1L9P-201ENST00000604264 2108 ntBASIC17.2■□□□□ 0.34
APLFQ8IW19 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms