Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HERC6Q8IVU3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.65■□□□□ 0.58
HERC6Q8IVU3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HERC6Q8IVU3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HERC6Q8IVU3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HERC6Q8IVU3 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HERC6Q8IVU3 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HERC6Q8IVU3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.65■□□□□ 0.58
HERC6Q8IVU3 AC002472.2-201ENST00000442739 958 ntBASIC18.65■□□□□ 0.58
HERC6Q8IVU3 AL592309.1-201ENST00000443127 649 ntBASIC18.65■□□□□ 0.58
HERC6Q8IVU3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.65■□□□□ 0.58
HERC6Q8IVU3 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.65■□□□□ 0.58
HERC6Q8IVU3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.65■□□□□ 0.58
HERC6Q8IVU3 AC069335.1-201ENST00000489972 472 ntBASIC18.65■□□□□ 0.58
HERC6Q8IVU3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.65■□□□□ 0.58
HERC6Q8IVU3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.65■□□□□ 0.58
HERC6Q8IVU3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.65■□□□□ 0.58
HERC6Q8IVU3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.65■□□□□ 0.58
HERC6Q8IVU3 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.65■□□□□ 0.58
HERC6Q8IVU3 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.65■□□□□ 0.58
HERC6Q8IVU3 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.65■□□□□ 0.58
HERC6Q8IVU3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HERC6Q8IVU3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
HERC6Q8IVU3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HERC6Q8IVU3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HERC6Q8IVU3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HERC6Q8IVU3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
HERC6Q8IVU3 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
HERC6Q8IVU3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.65■□□□□ 0.58
HERC6Q8IVU3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HERC6Q8IVU3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.65■□□□□ 0.58
HERC6Q8IVU3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HERC6Q8IVU3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HERC6Q8IVU3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
HERC6Q8IVU3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
HERC6Q8IVU3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HERC6Q8IVU3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.64■□□□□ 0.58
HERC6Q8IVU3 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.64■□□□□ 0.58
HERC6Q8IVU3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HERC6Q8IVU3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HERC6Q8IVU3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.58
HERC6Q8IVU3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
HERC6Q8IVU3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.64■□□□□ 0.58
HERC6Q8IVU3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
HERC6Q8IVU3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
HERC6Q8IVU3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.64■□□□□ 0.57
HERC6Q8IVU3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HERC6Q8IVU3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HERC6Q8IVU3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HERC6Q8IVU3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HERC6Q8IVU3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HERC6Q8IVU3 MIR943-201ENST00000401286 94 ntBASIC18.64■□□□□ 0.57
HERC6Q8IVU3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.64■□□□□ 0.57
HERC6Q8IVU3 TSPY16P-201ENST00000449843 468 ntBASIC18.64■□□□□ 0.57
HERC6Q8IVU3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HERC6Q8IVU3 AL512356.2-201ENST00000546955 174 ntBASIC18.64■□□□□ 0.57
HERC6Q8IVU3 AC005225.4-201ENST00000557330 545 ntBASIC18.64■□□□□ 0.57
HERC6Q8IVU3 RN7SL204P-201ENST00000582831 262 ntBASIC18.64■□□□□ 0.57
HERC6Q8IVU3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.64■□□□□ 0.57
HERC6Q8IVU3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.64■□□□□ 0.57
HERC6Q8IVU3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HERC6Q8IVU3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HERC6Q8IVU3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HERC6Q8IVU3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.64■□□□□ 0.57
HERC6Q8IVU3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.64■□□□□ 0.57
HERC6Q8IVU3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.64■□□□□ 0.57
HERC6Q8IVU3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HERC6Q8IVU3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HERC6Q8IVU3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.64■□□□□ 0.57
HERC6Q8IVU3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HERC6Q8IVU3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HERC6Q8IVU3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HERC6Q8IVU3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
HERC6Q8IVU3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
HERC6Q8IVU3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HERC6Q8IVU3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HERC6Q8IVU3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.63■□□□□ 0.57
HERC6Q8IVU3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HERC6Q8IVU3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HERC6Q8IVU3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HERC6Q8IVU3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.63■□□□□ 0.57
HERC6Q8IVU3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HERC6Q8IVU3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HERC6Q8IVU3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HERC6Q8IVU3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.63■□□□□ 0.57
HERC6Q8IVU3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HERC6Q8IVU3 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HERC6Q8IVU3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
HERC6Q8IVU3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.63■□□□□ 0.57
HERC6Q8IVU3 AC079140.1-201ENST00000508039 487 ntBASIC18.63■□□□□ 0.57
HERC6Q8IVU3 TUBB3P1-201ENST00000405796 1332 ntBASIC18.63■□□□□ 0.57
HERC6Q8IVU3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.63■□□□□ 0.57
HERC6Q8IVU3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HERC6Q8IVU3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.63■□□□□ 0.57
HERC6Q8IVU3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HERC6Q8IVU3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HERC6Q8IVU3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.63■□□□□ 0.57
HERC6Q8IVU3 AC104581.1-202ENST00000635932 2618 ntBASIC18.63■□□□□ 0.57
HERC6Q8IVU3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.63■□□□□ 0.57
HERC6Q8IVU3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms