Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CROCCP3Q8IVE0 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CROCCP3Q8IVE0 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.71■□□□□ 0.11
CROCCP3Q8IVE0 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CROCCP3Q8IVE0 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CROCCP3Q8IVE0 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CROCCP3Q8IVE0 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CROCCP3Q8IVE0 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.71■□□□□ 0.11
CROCCP3Q8IVE0 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.71■□□□□ 0.11
CROCCP3Q8IVE0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC15.71■□□□□ 0.11
CROCCP3Q8IVE0 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CROCCP3Q8IVE0 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CROCCP3Q8IVE0 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CROCCP3Q8IVE0 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CROCCP3Q8IVE0 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CROCCP3Q8IVE0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CROCCP3Q8IVE0 MIR663A-201ENST00000385250 93 ntBASIC15.71■□□□□ 0.11
CROCCP3Q8IVE0 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.71■□□□□ 0.11
CROCCP3Q8IVE0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CROCCP3Q8IVE0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CROCCP3Q8IVE0 AC009065.1-201ENST00000564055 1225 ntBASIC15.71■□□□□ 0.11
CROCCP3Q8IVE0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.71■□□□□ 0.11
CROCCP3Q8IVE0 AC073111.5-205ENST00000641717 521 ntBASIC15.71■□□□□ 0.11
CROCCP3Q8IVE0 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.71■□□□□ 0.11
CROCCP3Q8IVE0 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
CROCCP3Q8IVE0 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CROCCP3Q8IVE0 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CROCCP3Q8IVE0 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.71■□□□□ 0.11
CROCCP3Q8IVE0 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.71■□□□□ 0.11
CROCCP3Q8IVE0 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.71■□□□□ 0.1
CROCCP3Q8IVE0 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.71■□□□□ 0.1
CROCCP3Q8IVE0 CICP4-201ENST00000447359 2812 ntBASIC15.71■□□□□ 0.1
CROCCP3Q8IVE0 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CROCCP3Q8IVE0 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CROCCP3Q8IVE0 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CROCCP3Q8IVE0 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.71■□□□□ 0.1
CROCCP3Q8IVE0 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 AC126755.1-201ENST00000525846 6405 ntBASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 AC026185.1-201ENST00000445748 174 ntBASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 KRT16P5-201ENST00000455284 522 ntBASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 AC080038.1-201ENST00000611274 1154 ntBASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
CROCCP3Q8IVE0 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CROCCP3Q8IVE0 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC15.69■□□□□ 0.1
CROCCP3Q8IVE0 AC022898.2-201ENST00000616822 1312 ntBASIC15.69■□□□□ 0.1
CROCCP3Q8IVE0 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
CROCCP3Q8IVE0 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CROCCP3Q8IVE0 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CROCCP3Q8IVE0 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CROCCP3Q8IVE0 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.69■□□□□ 0.1
CROCCP3Q8IVE0 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CROCCP3Q8IVE0 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.69■□□□□ 0.1
CROCCP3Q8IVE0 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CROCCP3Q8IVE0 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.69■□□□□ 0.1
CROCCP3Q8IVE0 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CROCCP3Q8IVE0 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CROCCP3Q8IVE0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CROCCP3Q8IVE0 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CROCCP3Q8IVE0 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC15.69■□□□□ 0.1
CROCCP3Q8IVE0 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC15.69■□□□□ 0.1
CROCCP3Q8IVE0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CROCCP3Q8IVE0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CROCCP3Q8IVE0 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CROCCP3Q8IVE0 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.69■□□□□ 0.1
CROCCP3Q8IVE0 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CROCCP3Q8IVE0 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CROCCP3Q8IVE0 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.69■□□□□ 0.1
CROCCP3Q8IVE0 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms