Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC28Q86X40 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
LRRC28Q86X40 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC28Q86X40 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
LRRC28Q86X40 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRC28Q86X40 AC008741.2-201ENST00000612792 3115 ntBASIC15.43■□□□□ 0.06
LRRC28Q86X40 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRC28Q86X40 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
LRRC28Q86X40 PCDHB17P-201ENST00000539533 2393 ntBASIC15.43■□□□□ 0.06
LRRC28Q86X40 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRC28Q86X40 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRRC28Q86X40 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
LRRC28Q86X40 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRC28Q86X40 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRC28Q86X40 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
LRRC28Q86X40 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.43■□□□□ 0.06
LRRC28Q86X40 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
LRRC28Q86X40 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRRC28Q86X40 REXO1L11P-201ENST00000620964 1927 ntBASIC15.43■□□□□ 0.06
LRRC28Q86X40 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRC28Q86X40 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRC28Q86X40 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRC28Q86X40 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRC28Q86X40 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.43■□□□□ 0.06
LRRC28Q86X40 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRC28Q86X40 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRC28Q86X40 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRC28Q86X40 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRC28Q86X40 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.43■□□□□ 0.06
LRRC28Q86X40 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.43■□□□□ 0.06
LRRC28Q86X40 SPDYE13P-201ENST00000445314 798 ntBASIC15.43■□□□□ 0.06
LRRC28Q86X40 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.43■□□□□ 0.06
LRRC28Q86X40 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.43■□□□□ 0.06
LRRC28Q86X40 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.43■□□□□ 0.06
LRRC28Q86X40 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.43■□□□□ 0.06
LRRC28Q86X40 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.43■□□□□ 0.06
LRRC28Q86X40 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.43■□□□□ 0.06
LRRC28Q86X40 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
LRRC28Q86X40 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRC28Q86X40 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRC28Q86X40 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
LRRC28Q86X40 AC132938.6-201ENST00000623828 1655 ntBASIC15.43■□□□□ 0.06
LRRC28Q86X40 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRC28Q86X40 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRC28Q86X40 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
LRRC28Q86X40 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRC28Q86X40 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRC28Q86X40 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRC28Q86X40 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.43■□□□□ 0.06
LRRC28Q86X40 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
LRRC28Q86X40 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.43■□□□□ 0.06
LRRC28Q86X40 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
LRRC28Q86X40 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.43■□□□□ 0.06
LRRC28Q86X40 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
LRRC28Q86X40 AC005915.1-201ENST00000624912 2018 ntBASIC15.43■□□□□ 0.06
LRRC28Q86X40 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRRC28Q86X40 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.43■□□□□ 0.06
LRRC28Q86X40 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
LRRC28Q86X40 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRC28Q86X40 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRC28Q86X40 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRC28Q86X40 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
LRRC28Q86X40 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.42■□□□□ 0.06
LRRC28Q86X40 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRC28Q86X40 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
LRRC28Q86X40 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRRC28Q86X40 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.42■□□□□ 0.06
LRRC28Q86X40 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.42■□□□□ 0.06
LRRC28Q86X40 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.42■□□□□ 0.06
LRRC28Q86X40 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRRC28Q86X40 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.42■□□□□ 0.06
LRRC28Q86X40 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRC28Q86X40 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.42■□□□□ 0.06
LRRC28Q86X40 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
LRRC28Q86X40 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.42■□□□□ 0.06
LRRC28Q86X40 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.42■□□□□ 0.06
LRRC28Q86X40 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.42■□□□□ 0.06
LRRC28Q86X40 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
LRRC28Q86X40 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
LRRC28Q86X40 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRC28Q86X40 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRC28Q86X40 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRC28Q86X40 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
LRRC28Q86X40 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRRC28Q86X40 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRC28Q86X40 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRC28Q86X40 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRC28Q86X40 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRC28Q86X40 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRC28Q86X40 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRC28Q86X40 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.42■□□□□ 0.06
LRRC28Q86X40 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
LRRC28Q86X40 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRRC28Q86X40 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
LRRC28Q86X40 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
LRRC28Q86X40 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC28Q86X40 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC28Q86X40 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRC28Q86X40 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRC28Q86X40 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms