Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.39■□□□□ 0.37
LYSMD3Q7Z3D4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.39■□□□□ 0.37
LYSMD3Q7Z3D4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
LYSMD3Q7Z3D4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LYSMD3Q7Z3D4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LYSMD3Q7Z3D4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
LYSMD3Q7Z3D4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 FDX1P1-201ENST00000449115 551 ntBASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 FAM197Y8-203ENST00000450145 560 ntBASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 PRYP5-201ENST00000451909 266 ntBASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 AP002469.2-201ENST00000531724 424 ntBASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 AC025062.2-201ENST00000605477 670 ntBASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 AC097637.2-201ENST00000624096 1997 ntBASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 OR6D1P-202ENST00000641007 5290 ntBASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 AC016396.2-201ENST00000562575 1417 ntBASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LYSMD3Q7Z3D4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 AL645608.8-201ENST00000606034 2086 ntBASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 AC073648.2-201ENST00000510116 352 ntBASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.37■□□□□ 0.37
LYSMD3Q7Z3D4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.36■□□□□ 0.37
LYSMD3Q7Z3D4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms