Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SHFQ7M4L6 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SHFQ7M4L6 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SHFQ7M4L6 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHFQ7M4L6 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SHFQ7M4L6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SHFQ7M4L6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SHFQ7M4L6 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHFQ7M4L6 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHFQ7M4L6 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHFQ7M4L6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.68■□□□□ 0.1
SHFQ7M4L6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.68■□□□□ 0.1
SHFQ7M4L6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SHFQ7M4L6 AC005104.2-201ENST00000427818 678 ntBASIC15.68■□□□□ 0.1
SHFQ7M4L6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHFQ7M4L6 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.68■□□□□ 0.1
SHFQ7M4L6 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHFQ7M4L6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHFQ7M4L6 AL441883.1-201ENST00000566170 1045 ntBASIC15.68■□□□□ 0.1
SHFQ7M4L6 AL662844.4-201ENST00000606367 2838 ntBASIC15.68■□□□□ 0.1
SHFQ7M4L6 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHFQ7M4L6 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHFQ7M4L6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SHFQ7M4L6 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
SHFQ7M4L6 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SHFQ7M4L6 LINC02012-201ENST00000608206 1725 ntBASIC15.68■□□□□ 0.1
SHFQ7M4L6 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.68■□□□□ 0.1
SHFQ7M4L6 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SHFQ7M4L6 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SHFQ7M4L6 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHFQ7M4L6 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.68■□□□□ 0.1
SHFQ7M4L6 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHFQ7M4L6 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.68■□□□□ 0.1
SHFQ7M4L6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHFQ7M4L6 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHFQ7M4L6 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.67■□□□□ 0.1
SHFQ7M4L6 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHFQ7M4L6 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SHFQ7M4L6 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHFQ7M4L6 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHFQ7M4L6 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHFQ7M4L6 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHFQ7M4L6 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SHFQ7M4L6 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.67■□□□□ 0.1
SHFQ7M4L6 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHFQ7M4L6 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SHFQ7M4L6 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SHFQ7M4L6 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHFQ7M4L6 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHFQ7M4L6 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SHFQ7M4L6 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.67■□□□□ 0.1
SHFQ7M4L6 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHFQ7M4L6 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHFQ7M4L6 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHFQ7M4L6 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHFQ7M4L6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SHFQ7M4L6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SHFQ7M4L6 SLC25A1P3-201ENST00000395415 828 ntBASIC15.67■□□□□ 0.1
SHFQ7M4L6 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.67■□□□□ 0.1
SHFQ7M4L6 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SHFQ7M4L6 BX664615.1-201ENST00000443558 458 ntBASIC15.67■□□□□ 0.1
SHFQ7M4L6 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.67■□□□□ 0.1
SHFQ7M4L6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.67■□□□□ 0.1
SHFQ7M4L6 AL139327.4-201ENST00000612362 153 ntBASIC15.67■□□□□ 0.1
SHFQ7M4L6 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.67■□□□□ 0.1
SHFQ7M4L6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SHFQ7M4L6 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHFQ7M4L6 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.67■□□□□ 0.1
SHFQ7M4L6 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.67■□□□□ 0.1
SHFQ7M4L6 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SHFQ7M4L6 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHFQ7M4L6 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SHFQ7M4L6 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHFQ7M4L6 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHFQ7M4L6 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
SHFQ7M4L6 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SHFQ7M4L6 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.67■□□□□ 0.1
SHFQ7M4L6 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHFQ7M4L6 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
SHFQ7M4L6 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SHFQ7M4L6 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHFQ7M4L6 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SHFQ7M4L6 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHFQ7M4L6 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
SHFQ7M4L6 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SHFQ7M4L6 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHFQ7M4L6 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.66■□□□□ 0.1
SHFQ7M4L6 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SHFQ7M4L6 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHFQ7M4L6 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
SHFQ7M4L6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.66■□□□□ 0.1
SHFQ7M4L6 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHFQ7M4L6 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SHFQ7M4L6 AC078925.2-201ENST00000624013 1973 ntBASIC15.66■□□□□ 0.1
SHFQ7M4L6 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHFQ7M4L6 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SHFQ7M4L6 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHFQ7M4L6 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHFQ7M4L6 AP003733.1-201ENST00000491725 852 ntBASIC15.66■□□□□ 0.1
SHFQ7M4L6 AC010203.1-204ENST00000548782 407 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms