Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC9.38□□□□□ -0.91
LCA10Q71F78 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC9.38□□□□□ -0.91
LCA10Q71F78 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC9.38□□□□□ -0.91
LCA10Q71F78 RHEB-204ENST00000472642 900 ntTSL 3 BASIC9.38□□□□□ -0.91
LCA10Q71F78 AC097658.1-201ENST00000475555 843 ntBASIC9.38□□□□□ -0.91
LCA10Q71F78 OR2A1-AS1-207ENST00000486094 819 ntBASIC9.38□□□□□ -0.91
LCA10Q71F78 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC9.38□□□□□ -0.91
LCA10Q71F78 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
LCA10Q71F78 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC9.38□□□□□ -0.91
LCA10Q71F78 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC9.38□□□□□ -0.91
LCA10Q71F78 VPS53-216ENST00000574029 585 ntTSL 4 BASIC9.38□□□□□ -0.91
LCA10Q71F78 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC9.38□□□□□ -0.91
LCA10Q71F78 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC9.38□□□□□ -0.91
LCA10Q71F78 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC9.38□□□□□ -0.91
LCA10Q71F78 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
LCA10Q71F78 AL121829.2-201ENST00000620908 328 ntBASIC9.38□□□□□ -0.91
LCA10Q71F78 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
LCA10Q71F78 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC9.38□□□□□ -0.91
LCA10Q71F78 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
LCA10Q71F78 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
LCA10Q71F78 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC9.38□□□□□ -0.91
LCA10Q71F78 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC9.38□□□□□ -0.91
LCA10Q71F78 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
LCA10Q71F78 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
LCA10Q71F78 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC9.38□□□□□ -0.91
LCA10Q71F78 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC9.38□□□□□ -0.91
LCA10Q71F78 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC9.38□□□□□ -0.91
LCA10Q71F78 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC9.38□□□□□ -0.91
LCA10Q71F78 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC9.38□□□□□ -0.91
LCA10Q71F78 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC9.38□□□□□ -0.91
LCA10Q71F78 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
LCA10Q71F78 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
LCA10Q71F78 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
LCA10Q71F78 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
LCA10Q71F78 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC9.37□□□□□ -0.91
LCA10Q71F78 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LCA10Q71F78 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC9.37□□□□□ -0.91
LCA10Q71F78 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC9.37□□□□□ -0.91
LCA10Q71F78 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LCA10Q71F78 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
LCA10Q71F78 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC9.37□□□□□ -0.91
LCA10Q71F78 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LCA10Q71F78 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LCA10Q71F78 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LCA10Q71F78 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
LCA10Q71F78 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
LCA10Q71F78 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LCA10Q71F78 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
LCA10Q71F78 GRK6P1-201ENST00000400595 1711 ntBASIC9.37□□□□□ -0.91
LCA10Q71F78 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
LCA10Q71F78 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
LCA10Q71F78 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC9.37□□□□□ -0.91
LCA10Q71F78 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
LCA10Q71F78 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LCA10Q71F78 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC9.37□□□□□ -0.91
LCA10Q71F78 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LCA10Q71F78 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LCA10Q71F78 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
LCA10Q71F78 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LCA10Q71F78 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LCA10Q71F78 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
LCA10Q71F78 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LCA10Q71F78 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LCA10Q71F78 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LCA10Q71F78 TREX2-204ENST00000370212 861 ntTSL 5 BASIC9.37□□□□□ -0.91
LCA10Q71F78 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
LCA10Q71F78 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
LCA10Q71F78 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
LCA10Q71F78 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC9.37□□□□□ -0.91
LCA10Q71F78 PPP1R14BP2-201ENST00000426284 444 ntBASIC9.37□□□□□ -0.91
LCA10Q71F78 PARL-206ENST00000435888 1098 ntTSL 5 BASIC9.37□□□□□ -0.91
LCA10Q71F78 SLC29A4P2-201ENST00000504749 1089 ntBASIC9.37□□□□□ -0.91
LCA10Q71F78 DLX3-202ENST00000512495 834 ntTSL 2 BASIC9.37□□□□□ -0.91
LCA10Q71F78 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC9.37□□□□□ -0.91
LCA10Q71F78 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms