Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NHLRC1Q6VVB1 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.57■□□□□ 0.08
NHLRC1Q6VVB1 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NHLRC1Q6VVB1 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NHLRC1Q6VVB1 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NHLRC1Q6VVB1 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
NHLRC1Q6VVB1 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
NHLRC1Q6VVB1 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NHLRC1Q6VVB1 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.57■□□□□ 0.08
NHLRC1Q6VVB1 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
NHLRC1Q6VVB1 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
NHLRC1Q6VVB1 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.57■□□□□ 0.08
NHLRC1Q6VVB1 NUS1P1-201ENST00000446295 882 ntBASIC15.57■□□□□ 0.08
NHLRC1Q6VVB1 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
NHLRC1Q6VVB1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.57■□□□□ 0.08
NHLRC1Q6VVB1 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.57■□□□□ 0.08
NHLRC1Q6VVB1 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.57■□□□□ 0.08
NHLRC1Q6VVB1 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.57■□□□□ 0.08
NHLRC1Q6VVB1 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.57■□□□□ 0.08
NHLRC1Q6VVB1 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
NHLRC1Q6VVB1 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NHLRC1Q6VVB1 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NHLRC1Q6VVB1 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
NHLRC1Q6VVB1 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.57■□□□□ 0.08
NHLRC1Q6VVB1 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NHLRC1Q6VVB1 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NHLRC1Q6VVB1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NHLRC1Q6VVB1 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NHLRC1Q6VVB1 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
NHLRC1Q6VVB1 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.57■□□□□ 0.08
NHLRC1Q6VVB1 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
NHLRC1Q6VVB1 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NHLRC1Q6VVB1 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 AP001094.4-201ENST00000579008 2176 ntBASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 KRT16P4-201ENST00000453883 522 ntBASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 AC096582.2-201ENST00000510860 516 ntBASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 AC099336.1-202ENST00000602961 463 ntBASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NHLRC1Q6VVB1 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
NHLRC1Q6VVB1 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NHLRC1Q6VVB1 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NHLRC1Q6VVB1 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NHLRC1Q6VVB1 PCDH8P1-201ENST00000428983 2773 ntBASIC15.55■□□□□ 0.08
NHLRC1Q6VVB1 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
NHLRC1Q6VVB1 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NHLRC1Q6VVB1 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NHLRC1Q6VVB1 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.55■□□□□ 0.08
NHLRC1Q6VVB1 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NHLRC1Q6VVB1 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.55■□□□□ 0.08
NHLRC1Q6VVB1 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
NHLRC1Q6VVB1 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NHLRC1Q6VVB1 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NHLRC1Q6VVB1 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NHLRC1Q6VVB1 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.55■□□□□ 0.08
NHLRC1Q6VVB1 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NHLRC1Q6VVB1 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms