Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNKSR3Q6P9H4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNKSR3Q6P9H4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CNKSR3Q6P9H4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CNKSR3Q6P9H4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.45■□□□□ 0.54
CNKSR3Q6P9H4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
CNKSR3Q6P9H4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.45■□□□□ 0.54
CNKSR3Q6P9H4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CNKSR3Q6P9H4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CNKSR3Q6P9H4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNKSR3Q6P9H4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNKSR3Q6P9H4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CNKSR3Q6P9H4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.45■□□□□ 0.54
CNKSR3Q6P9H4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.45■□□□□ 0.54
CNKSR3Q6P9H4 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.45■□□□□ 0.54
CNKSR3Q6P9H4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.45■□□□□ 0.54
CNKSR3Q6P9H4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNKSR3Q6P9H4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.45■□□□□ 0.54
CNKSR3Q6P9H4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.45■□□□□ 0.54
CNKSR3Q6P9H4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNKSR3Q6P9H4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNKSR3Q6P9H4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.45■□□□□ 0.54
CNKSR3Q6P9H4 AL353732.1-201ENST00000569618 1459 ntBASIC18.45■□□□□ 0.54
CNKSR3Q6P9H4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CNKSR3Q6P9H4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNKSR3Q6P9H4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 AC138028.4-201ENST00000564984 1845 ntBASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 SLC25A24-204ENST00000569674 2357 ntBASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 HCG4-201ENST00000418983 998 ntBASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 GAPDHP21-201ENST00000450301 1010 ntBASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 AC097493.3-201ENST00000509725 367 ntBASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 ALG1L8P-201ENST00000533887 760 ntBASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 AC008267.7-201ENST00000624570 1194 ntBASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CNKSR3Q6P9H4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CNKSR3Q6P9H4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CNKSR3Q6P9H4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNKSR3Q6P9H4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNKSR3Q6P9H4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.43■□□□□ 0.54
CNKSR3Q6P9H4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNKSR3Q6P9H4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNKSR3Q6P9H4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.43■□□□□ 0.54
CNKSR3Q6P9H4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNKSR3Q6P9H4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNKSR3Q6P9H4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNKSR3Q6P9H4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CNKSR3Q6P9H4 GK-202ENST00000378941 458 ntTSL 3 BASIC18.43■□□□□ 0.54
CNKSR3Q6P9H4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNKSR3Q6P9H4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.43■□□□□ 0.54
CNKSR3Q6P9H4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CNKSR3Q6P9H4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CNKSR3Q6P9H4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.43■□□□□ 0.54
CNKSR3Q6P9H4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNKSR3Q6P9H4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
CNKSR3Q6P9H4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.43■□□□□ 0.54
CNKSR3Q6P9H4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNKSR3Q6P9H4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CNKSR3Q6P9H4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.43■□□□□ 0.54
CNKSR3Q6P9H4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNKSR3Q6P9H4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR3Q6P9H4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CNKSR3Q6P9H4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR3Q6P9H4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR3Q6P9H4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR3Q6P9H4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR3Q6P9H4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR3Q6P9H4 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNKSR3Q6P9H4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms