Protein–RNA interactions for Protein: Q6P3S1

DENND1B, DENN domain-containing protein 1B, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1BQ6P3S1 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DENND1BQ6P3S1 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.3■□□□□ 0.52
DENND1BQ6P3S1 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.3■□□□□ 0.52
DENND1BQ6P3S1 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
DENND1BQ6P3S1 OR6D1P-202ENST00000641007 5290 ntBASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 ACTG1P4-201ENST00000425123 1122 ntBASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 SCARNA2-201ENST00000458748 420 ntBASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 AL121912.1-201ENST00000603683 238 ntBASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 EGFEM1P-202ENST00000431685 1563 ntBASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DENND1BQ6P3S1 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.28■□□□□ 0.52
DENND1BQ6P3S1 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
DENND1BQ6P3S1 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DENND1BQ6P3S1 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
DENND1BQ6P3S1 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DENND1BQ6P3S1 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DENND1BQ6P3S1 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.28■□□□□ 0.52
DENND1BQ6P3S1 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND1BQ6P3S1 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND1BQ6P3S1 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DENND1BQ6P3S1 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND1BQ6P3S1 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.28■□□□□ 0.52
DENND1BQ6P3S1 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DENND1BQ6P3S1 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND1BQ6P3S1 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
DENND1BQ6P3S1 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND1BQ6P3S1 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.28■□□□□ 0.52
DENND1BQ6P3S1 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.28■□□□□ 0.52
DENND1BQ6P3S1 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.28■□□□□ 0.52
DENND1BQ6P3S1 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND1BQ6P3S1 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND1BQ6P3S1 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND1BQ6P3S1 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND1BQ6P3S1 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND1BQ6P3S1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND1BQ6P3S1 AC060834.1-201ENST00000443027 2032 ntBASIC18.28■□□□□ 0.52
DENND1BQ6P3S1 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.28■□□□□ 0.52
DENND1BQ6P3S1 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND1BQ6P3S1 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND1BQ6P3S1 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DENND1BQ6P3S1 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DENND1BQ6P3S1 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
DENND1BQ6P3S1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
DENND1BQ6P3S1 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DENND1BQ6P3S1 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
DENND1BQ6P3S1 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DENND1BQ6P3S1 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.27■□□□□ 0.52
DENND1BQ6P3S1 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.27■□□□□ 0.52
DENND1BQ6P3S1 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DENND1BQ6P3S1 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
DENND1BQ6P3S1 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.27■□□□□ 0.52
DENND1BQ6P3S1 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DENND1BQ6P3S1 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DENND1BQ6P3S1 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
DENND1BQ6P3S1 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
DENND1BQ6P3S1 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DENND1BQ6P3S1 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DENND1BQ6P3S1 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
DENND1BQ6P3S1 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DENND1BQ6P3S1 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
DENND1BQ6P3S1 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.27■□□□□ 0.52
DENND1BQ6P3S1 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
DENND1BQ6P3S1 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.27■□□□□ 0.52
DENND1BQ6P3S1 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.27■□□□□ 0.52
DENND1BQ6P3S1 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.27■□□□□ 0.52
DENND1BQ6P3S1 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms