Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC25.84■■□□□ 1.73
CDC42BPAQ5VT25 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC25.84■■□□□ 1.73
CDC42BPAQ5VT25 SPDYE12P-201ENST00000618416 771 ntBASIC25.84■■□□□ 1.73
CDC42BPAQ5VT25 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC25.84■■□□□ 1.73
CDC42BPAQ5VT25 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CDC42BPAQ5VT25 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CDC42BPAQ5VT25 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC25.84■■□□□ 1.73
CDC42BPAQ5VT25 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC25.84■■□□□ 1.73
CDC42BPAQ5VT25 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CDC42BPAQ5VT25 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CDC42BPAQ5VT25 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC25.83■■□□□ 1.73
CDC42BPAQ5VT25 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CDC42BPAQ5VT25 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CDC42BPAQ5VT25 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CDC42BPAQ5VT25 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC25.83■■□□□ 1.73
CDC42BPAQ5VT25 HNRNPA1P40-201ENST00000426371 1278 ntBASIC25.83■■□□□ 1.73
CDC42BPAQ5VT25 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CDC42BPAQ5VT25 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC25.83■■□□□ 1.73
CDC42BPAQ5VT25 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC25.83■■□□□ 1.73
CDC42BPAQ5VT25 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC25.83■■□□□ 1.73
CDC42BPAQ5VT25 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CDC42BPAQ5VT25 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CDC42BPAQ5VT25 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
CDC42BPAQ5VT25 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CDC42BPAQ5VT25 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
CDC42BPAQ5VT25 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CDC42BPAQ5VT25 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CDC42BPAQ5VT25 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.72
CDC42BPAQ5VT25 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
CDC42BPAQ5VT25 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC25.83■■□□□ 1.72
CDC42BPAQ5VT25 MEIS3P1-201ENST00000495167 958 ntBASIC25.83■■□□□ 1.72
CDC42BPAQ5VT25 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.72
CDC42BPAQ5VT25 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC25.83■■□□□ 1.72
CDC42BPAQ5VT25 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC25.82■■□□□ 1.72
CDC42BPAQ5VT25 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CDC42BPAQ5VT25 AC131009.4-201ENST00000624048 1740 ntBASIC25.82■■□□□ 1.72
CDC42BPAQ5VT25 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CDC42BPAQ5VT25 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CDC42BPAQ5VT25 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CDC42BPAQ5VT25 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CDC42BPAQ5VT25 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC25.82■■□□□ 1.72
CDC42BPAQ5VT25 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC25.82■■□□□ 1.72
CDC42BPAQ5VT25 AC005034.1-201ENST00000426657 489 ntBASIC25.82■■□□□ 1.72
CDC42BPAQ5VT25 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CDC42BPAQ5VT25 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CDC42BPAQ5VT25 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC25.81■■□□□ 1.72
CDC42BPAQ5VT25 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
CDC42BPAQ5VT25 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CDC42BPAQ5VT25 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CDC42BPAQ5VT25 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CDC42BPAQ5VT25 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CDC42BPAQ5VT25 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC25.81■■□□□ 1.72
CDC42BPAQ5VT25 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC25.81■■□□□ 1.72
CDC42BPAQ5VT25 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC25.81■■□□□ 1.72
CDC42BPAQ5VT25 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
CDC42BPAQ5VT25 PUDP-206ENST00000540122 825 ntTSL 2 BASIC25.81■■□□□ 1.72
CDC42BPAQ5VT25 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC25.81■■□□□ 1.72
CDC42BPAQ5VT25 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC25.81■■□□□ 1.72
CDC42BPAQ5VT25 SPDYE22P-201ENST00000582158 798 ntBASIC25.81■■□□□ 1.72
CDC42BPAQ5VT25 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CDC42BPAQ5VT25 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC25.81■■□□□ 1.72
CDC42BPAQ5VT25 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC25.81■■□□□ 1.72
CDC42BPAQ5VT25 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC25.81■■□□□ 1.72
CDC42BPAQ5VT25 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CDC42BPAQ5VT25 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CDC42BPAQ5VT25 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CDC42BPAQ5VT25 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CDC42BPAQ5VT25 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC25.81■■□□□ 1.72
CDC42BPAQ5VT25 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CDC42BPAQ5VT25 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC25.8■■□□□ 1.72
CDC42BPAQ5VT25 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CDC42BPAQ5VT25 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC25.8■■□□□ 1.72
CDC42BPAQ5VT25 TMPRSS11CP-201ENST00000453277 683 ntBASIC25.8■■□□□ 1.72
CDC42BPAQ5VT25 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC25.8■■□□□ 1.72
CDC42BPAQ5VT25 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC25.8■■□□□ 1.72
CDC42BPAQ5VT25 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CDC42BPAQ5VT25 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC25.8■■□□□ 1.72
CDC42BPAQ5VT25 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
CDC42BPAQ5VT25 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CDC42BPAQ5VT25 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CDC42BPAQ5VT25 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CDC42BPAQ5VT25 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC25.8■■□□□ 1.72
CDC42BPAQ5VT25 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC25.8■■□□□ 1.72
CDC42BPAQ5VT25 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
CDC42BPAQ5VT25 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC25.8■■□□□ 1.72
CDC42BPAQ5VT25 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CDC42BPAQ5VT25 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC25.8■■□□□ 1.72
CDC42BPAQ5VT25 HLA-J-202ENST00000469281 1241 ntBASIC25.8■■□□□ 1.72
CDC42BPAQ5VT25 SERBP1P5-201ENST00000510079 1181 ntBASIC25.8■■□□□ 1.72
CDC42BPAQ5VT25 AC105233.2-201ENST00000523697 349 ntBASIC25.8■■□□□ 1.72
CDC42BPAQ5VT25 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC25.8■■□□□ 1.72
CDC42BPAQ5VT25 AF228730.5-201ENST00000530288 346 ntBASIC25.8■■□□□ 1.72
CDC42BPAQ5VT25 COQ9-214ENST00000567933 882 ntTSL 3 BASIC25.8■■□□□ 1.72
CDC42BPAQ5VT25 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC25.79■■□□□ 1.72
CDC42BPAQ5VT25 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CDC42BPAQ5VT25 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC25.79■■□□□ 1.72
CDC42BPAQ5VT25 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CDC42BPAQ5VT25 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
CDC42BPAQ5VT25 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CDC42BPAQ5VT25 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms