Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AL590560.3-201ENST00000623350 461 ntBASIC21.55■■□□□ 1.04
RC3H1Q5TC82 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC21.55■■□□□ 1.04
RC3H1Q5TC82 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC21.55■■□□□ 1.04
RC3H1Q5TC82 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RC3H1Q5TC82 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.55■■□□□ 1.04
RC3H1Q5TC82 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RC3H1Q5TC82 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RC3H1Q5TC82 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RC3H1Q5TC82 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC21.55■■□□□ 1.04
RC3H1Q5TC82 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.55■■□□□ 1.04
RC3H1Q5TC82 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
RC3H1Q5TC82 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.55■■□□□ 1.04
RC3H1Q5TC82 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RC3H1Q5TC82 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RC3H1Q5TC82 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RC3H1Q5TC82 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RC3H1Q5TC82 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RC3H1Q5TC82 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RC3H1Q5TC82 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RC3H1Q5TC82 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RC3H1Q5TC82 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RC3H1Q5TC82 SLC22A20-204ENST00000530038 1673 ntBASIC21.54■■□□□ 1.04
RC3H1Q5TC82 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.54■■□□□ 1.04
RC3H1Q5TC82 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC21.54■■□□□ 1.04
RC3H1Q5TC82 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.54■■□□□ 1.04
RC3H1Q5TC82 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RC3H1Q5TC82 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC21.54■■□□□ 1.04
RC3H1Q5TC82 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC21.54■■□□□ 1.04
RC3H1Q5TC82 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RC3H1Q5TC82 NME2P1-201ENST00000426182 414 ntBASIC21.54■■□□□ 1.04
RC3H1Q5TC82 MEIS3P1-201ENST00000495167 958 ntBASIC21.54■■□□□ 1.04
RC3H1Q5TC82 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RC3H1Q5TC82 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC21.54■■□□□ 1.04
RC3H1Q5TC82 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
RC3H1Q5TC82 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC21.54■■□□□ 1.04
RC3H1Q5TC82 AL596325.1-201ENST00000563991 1082 ntBASIC21.54■■□□□ 1.04
RC3H1Q5TC82 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC21.54■■□□□ 1.04
RC3H1Q5TC82 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC21.54■■□□□ 1.04
RC3H1Q5TC82 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RC3H1Q5TC82 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RC3H1Q5TC82 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
RC3H1Q5TC82 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
RC3H1Q5TC82 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
RC3H1Q5TC82 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RC3H1Q5TC82 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RC3H1Q5TC82 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RC3H1Q5TC82 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RC3H1Q5TC82 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.53■■□□□ 1.04
RC3H1Q5TC82 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
RC3H1Q5TC82 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
RC3H1Q5TC82 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC21.53■■□□□ 1.04
RC3H1Q5TC82 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RC3H1Q5TC82 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RC3H1Q5TC82 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RC3H1Q5TC82 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RC3H1Q5TC82 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RC3H1Q5TC82 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RC3H1Q5TC82 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC21.53■■□□□ 1.04
RC3H1Q5TC82 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC21.53■■□□□ 1.04
RC3H1Q5TC82 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RC3H1Q5TC82 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC21.53■■□□□ 1.04
RC3H1Q5TC82 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
RC3H1Q5TC82 AC009118.2-201ENST00000613275 655 ntBASIC21.53■■□□□ 1.04
RC3H1Q5TC82 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RC3H1Q5TC82 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RC3H1Q5TC82 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
RC3H1Q5TC82 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC21.53■■□□□ 1.04
RC3H1Q5TC82 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.53■■□□□ 1.04
RC3H1Q5TC82 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RC3H1Q5TC82 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RC3H1Q5TC82 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RC3H1Q5TC82 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RC3H1Q5TC82 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RC3H1Q5TC82 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.52■■□□□ 1.04
RC3H1Q5TC82 TOP3BP1-201ENST00000420768 1380 ntBASIC21.52■■□□□ 1.04
RC3H1Q5TC82 TDG-209ENST00000544861 1387 ntTSL 2 BASIC21.52■■□□□ 1.04
RC3H1Q5TC82 AC090164.3-201ENST00000610780 2143 ntBASIC21.52■■□□□ 1.04
RC3H1Q5TC82 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.52■■□□□ 1.04
RC3H1Q5TC82 BX323043.1-201ENST00000641006 1765 ntBASIC21.52■■□□□ 1.04
RC3H1Q5TC82 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC21.52■■□□□ 1.04
RC3H1Q5TC82 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC21.52■■□□□ 1.04
RC3H1Q5TC82 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
RC3H1Q5TC82 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC21.52■■□□□ 1.04
RC3H1Q5TC82 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC21.52■■□□□ 1.04
RC3H1Q5TC82 AC073592.8-201ENST00000624126 511 ntBASIC21.52■■□□□ 1.04
RC3H1Q5TC82 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC21.52■■□□□ 1.04
RC3H1Q5TC82 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.52■■□□□ 1.04
RC3H1Q5TC82 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RC3H1Q5TC82 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RC3H1Q5TC82 AC100757.3-201ENST00000622361 1406 ntBASIC21.52■■□□□ 1.04
RC3H1Q5TC82 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RC3H1Q5TC82 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RC3H1Q5TC82 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.52■■□□□ 1.03
RC3H1Q5TC82 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.52■■□□□ 1.03
RC3H1Q5TC82 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RC3H1Q5TC82 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RC3H1Q5TC82 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
RC3H1Q5TC82 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RC3H1Q5TC82 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RC3H1Q5TC82 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms