Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SGO1Q5FBB7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SGO1Q5FBB7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SGO1Q5FBB7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.85■□□□□ 0.29
SGO1Q5FBB7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SGO1Q5FBB7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.85■□□□□ 0.29
SGO1Q5FBB7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SGO1Q5FBB7 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SGO1Q5FBB7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.85■□□□□ 0.29
SGO1Q5FBB7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SGO1Q5FBB7 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SGO1Q5FBB7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SGO1Q5FBB7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SGO1Q5FBB7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.85■□□□□ 0.29
SGO1Q5FBB7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SGO1Q5FBB7 AC016734.2-201ENST00000624325 1377 ntBASIC16.85■□□□□ 0.29
SGO1Q5FBB7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.85■□□□□ 0.29
SGO1Q5FBB7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SGO1Q5FBB7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SGO1Q5FBB7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.85■□□□□ 0.29
SGO1Q5FBB7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SGO1Q5FBB7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SGO1Q5FBB7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SGO1Q5FBB7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SGO1Q5FBB7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SGO1Q5FBB7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SGO1Q5FBB7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SGO1Q5FBB7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 CHCHD2P8-201ENST00000429873 447 ntBASIC16.84■□□□□ 0.29
SGO1Q5FBB7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 FAM210CP-201ENST00000445714 574 ntBASIC16.84■□□□□ 0.29
SGO1Q5FBB7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 KRT18P1-202ENST00000452408 1331 ntBASIC16.84■□□□□ 0.29
SGO1Q5FBB7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 AC079328.2-201ENST00000561241 3354 ntBASIC16.84■□□□□ 0.29
SGO1Q5FBB7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SGO1Q5FBB7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
SGO1Q5FBB7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.83■□□□□ 0.29
SGO1Q5FBB7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.83■□□□□ 0.29
SGO1Q5FBB7 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SGO1Q5FBB7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SGO1Q5FBB7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SGO1Q5FBB7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SGO1Q5FBB7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SGO1Q5FBB7 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SGO1Q5FBB7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SGO1Q5FBB7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SGO1Q5FBB7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SGO1Q5FBB7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SGO1Q5FBB7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.83■□□□□ 0.28
SGO1Q5FBB7 KRT8P10-201ENST00000450021 1447 ntBASIC16.83■□□□□ 0.28
SGO1Q5FBB7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.83■□□□□ 0.28
SGO1Q5FBB7 VENTXP7-201ENST00000475503 772 ntBASIC16.83■□□□□ 0.28
SGO1Q5FBB7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.83■□□□□ 0.28
SGO1Q5FBB7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SGO1Q5FBB7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.83■□□□□ 0.28
SGO1Q5FBB7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.83■□□□□ 0.28
SGO1Q5FBB7 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SGO1Q5FBB7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SGO1Q5FBB7 AL353801.3-201ENST00000609898 542 ntBASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms