Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 AC122714.2-201ENST00000502787 707 ntBASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 VENTXP5-201ENST00000523979 775 ntBASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 AL049757.1-201ENST00000616842 1596 ntBASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RUNDC3AQ59EK9 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 EGFEM1P-202ENST00000431685 1563 ntBASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 AC112907.2-201ENST00000448639 330 ntBASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 AC073508.3-201ENST00000619697 1419 ntBASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
RUNDC3AQ59EK9 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 AC092171.3-201ENST00000610122 2651 ntBASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 TERF1P1-201ENST00000311003 1181 ntBASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 AC113347.1-201ENST00000413321 391 ntBASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 TSPY5P-201ENST00000426936 936 ntBASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 AL137013.1-201ENST00000432946 1228 ntBASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 AC125634.1-201ENST00000438758 1403 ntBASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RUNDC3AQ59EK9 AC011270.2-201ENST00000624293 2550 ntBASIC16.34■□□□□ 0.21
RUNDC3AQ59EK9 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RUNDC3AQ59EK9 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RUNDC3AQ59EK9 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms