Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LONRF3Q496Y0 AGGF1P2-201ENST00000426656 2106 ntBASIC19.69■□□□□ 0.74
LONRF3Q496Y0 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LONRF3Q496Y0 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LONRF3Q496Y0 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.68■□□□□ 0.74
LONRF3Q496Y0 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LONRF3Q496Y0 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LONRF3Q496Y0 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.68■□□□□ 0.74
LONRF3Q496Y0 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LONRF3Q496Y0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LONRF3Q496Y0 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LONRF3Q496Y0 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LONRF3Q496Y0 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
LONRF3Q496Y0 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.68■□□□□ 0.74
LONRF3Q496Y0 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LONRF3Q496Y0 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LONRF3Q496Y0 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
LONRF3Q496Y0 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.68■□□□□ 0.74
LONRF3Q496Y0 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
LONRF3Q496Y0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.68■□□□□ 0.74
LONRF3Q496Y0 AF238378.1-201ENST00000526806 358 ntBASIC19.68■□□□□ 0.74
LONRF3Q496Y0 AP002469.2-201ENST00000531724 424 ntBASIC19.68■□□□□ 0.74
LONRF3Q496Y0 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LONRF3Q496Y0 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.68■□□□□ 0.74
LONRF3Q496Y0 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
LONRF3Q496Y0 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.68■□□□□ 0.74
LONRF3Q496Y0 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.68■□□□□ 0.74
LONRF3Q496Y0 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LONRF3Q496Y0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.68■□□□□ 0.74
LONRF3Q496Y0 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
LONRF3Q496Y0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LONRF3Q496Y0 AL049757.1-201ENST00000616842 1596 ntBASIC19.68■□□□□ 0.74
LONRF3Q496Y0 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LONRF3Q496Y0 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
LONRF3Q496Y0 AC092053.1-201ENST00000605787 1936 ntBASIC19.68■□□□□ 0.74
LONRF3Q496Y0 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.68■□□□□ 0.74
LONRF3Q496Y0 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.68■□□□□ 0.74
LONRF3Q496Y0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LONRF3Q496Y0 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LONRF3Q496Y0 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LONRF3Q496Y0 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LONRF3Q496Y0 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
LONRF3Q496Y0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.67■□□□□ 0.74
LONRF3Q496Y0 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.67■□□□□ 0.74
LONRF3Q496Y0 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LONRF3Q496Y0 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LONRF3Q496Y0 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LONRF3Q496Y0 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LONRF3Q496Y0 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LONRF3Q496Y0 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LONRF3Q496Y0 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.67■□□□□ 0.74
LONRF3Q496Y0 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LONRF3Q496Y0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
LONRF3Q496Y0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.67■□□□□ 0.74
LONRF3Q496Y0 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.67■□□□□ 0.74
LONRF3Q496Y0 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.67■□□□□ 0.74
LONRF3Q496Y0 AL121912.1-201ENST00000603683 238 ntBASIC19.67■□□□□ 0.74
LONRF3Q496Y0 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LONRF3Q496Y0 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LONRF3Q496Y0 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LONRF3Q496Y0 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LONRF3Q496Y0 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LONRF3Q496Y0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LONRF3Q496Y0 AC093525.9-201ENST00000624961 1746 ntBASIC19.67■□□□□ 0.74
LONRF3Q496Y0 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LONRF3Q496Y0 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LONRF3Q496Y0 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LONRF3Q496Y0 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.67■□□□□ 0.74
LONRF3Q496Y0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LONRF3Q496Y0 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LONRF3Q496Y0 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.66■□□□□ 0.74
LONRF3Q496Y0 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.66■□□□□ 0.74
LONRF3Q496Y0 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
LONRF3Q496Y0 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LONRF3Q496Y0 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LONRF3Q496Y0 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LONRF3Q496Y0 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LONRF3Q496Y0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LONRF3Q496Y0 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.66■□□□□ 0.74
LONRF3Q496Y0 LINC02012-201ENST00000608206 1725 ntBASIC19.66■□□□□ 0.74
LONRF3Q496Y0 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LONRF3Q496Y0 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LONRF3Q496Y0 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LONRF3Q496Y0 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LONRF3Q496Y0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LONRF3Q496Y0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.66■□□□□ 0.74
LONRF3Q496Y0 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.66■□□□□ 0.74
LONRF3Q496Y0 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.66■□□□□ 0.74
LONRF3Q496Y0 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.66■□□□□ 0.74
LONRF3Q496Y0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LONRF3Q496Y0 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.66■□□□□ 0.74
LONRF3Q496Y0 AL591684.3-201ENST00000605187 298 ntBASIC19.66■□□□□ 0.74
LONRF3Q496Y0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LONRF3Q496Y0 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LONRF3Q496Y0 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
LONRF3Q496Y0 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LONRF3Q496Y0 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LONRF3Q496Y0 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LONRF3Q496Y0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LONRF3Q496Y0 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms