Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 GPX1P2-201ENST00000429271 606 ntBASIC15.29■□□□□ 0.04
NKX6-1P78426 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.29■□□□□ 0.04
NKX6-1P78426 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.29■□□□□ 0.04
NKX6-1P78426 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.29■□□□□ 0.04
NKX6-1P78426 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.29■□□□□ 0.04
NKX6-1P78426 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.29■□□□□ 0.04
NKX6-1P78426 OR7E14P-202ENST00000530490 1290 ntBASIC15.29■□□□□ 0.04
NKX6-1P78426 AC040169.1-201ENST00000565382 521 ntBASIC15.29■□□□□ 0.04
NKX6-1P78426 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.29■□□□□ 0.04
NKX6-1P78426 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.29■□□□□ 0.04
NKX6-1P78426 AC116407.2-201ENST00000613639 860 ntBASIC15.29■□□□□ 0.04
NKX6-1P78426 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.29■□□□□ 0.04
NKX6-1P78426 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-1P78426 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.29■□□□□ 0.04
NKX6-1P78426 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-1P78426 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.29■□□□□ 0.04
NKX6-1P78426 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NKX6-1P78426 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
NKX6-1P78426 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-1P78426 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-1P78426 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-1P78426 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-1P78426 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NKX6-1P78426 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.29■□□□□ 0.04
NKX6-1P78426 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.29■□□□□ 0.04
NKX6-1P78426 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX6-1P78426 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.28■□□□□ 0.04
NKX6-1P78426 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NKX6-1P78426 AC009053.2-201ENST00000563701 2365 ntBASIC15.28■□□□□ 0.04
NKX6-1P78426 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
NKX6-1P78426 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NKX6-1P78426 AP005117.1-201ENST00000584346 1413 ntBASIC15.28■□□□□ 0.04
NKX6-1P78426 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX6-1P78426 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX6-1P78426 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX6-1P78426 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.28■□□□□ 0.04
NKX6-1P78426 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
NKX6-1P78426 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NKX6-1P78426 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX6-1P78426 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.28■□□□□ 0.04
NKX6-1P78426 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX6-1P78426 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.28■□□□□ 0.04
NKX6-1P78426 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.28■□□□□ 0.04
NKX6-1P78426 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.28■□□□□ 0.04
NKX6-1P78426 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.28■□□□□ 0.04
NKX6-1P78426 AC112482.1-201ENST00000492080 688 ntBASIC15.28■□□□□ 0.04
NKX6-1P78426 AC122714.2-201ENST00000502787 707 ntBASIC15.28■□□□□ 0.04
NKX6-1P78426 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.28■□□□□ 0.04
NKX6-1P78426 AC034105.1-201ENST00000563488 319 ntBASIC15.28■□□□□ 0.04
NKX6-1P78426 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.28■□□□□ 0.04
NKX6-1P78426 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.28■□□□□ 0.04
NKX6-1P78426 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NKX6-1P78426 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
NKX6-1P78426 Z83851.2-201ENST00000609564 659 ntBASIC15.28■□□□□ 0.04
NKX6-1P78426 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.28■□□□□ 0.04
NKX6-1P78426 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NKX6-1P78426 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX6-1P78426 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.28■□□□□ 0.04
NKX6-1P78426 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NKX6-1P78426 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NKX6-1P78426 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX6-1P78426 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX6-1P78426 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX6-1P78426 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
NKX6-1P78426 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NKX6-1P78426 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NKX6-1P78426 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
NKX6-1P78426 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.28■□□□□ 0.04
NKX6-1P78426 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
NKX6-1P78426 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NKX6-1P78426 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX6-1P78426 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX6-1P78426 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX6-1P78426 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX6-1P78426 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
NKX6-1P78426 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.27■□□□□ 0.04
NKX6-1P78426 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX6-1P78426 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX6-1P78426 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX6-1P78426 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.27■□□□□ 0.04
NKX6-1P78426 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
NKX6-1P78426 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NKX6-1P78426 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
NKX6-1P78426 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.27■□□□□ 0.04
NKX6-1P78426 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
NKX6-1P78426 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX6-1P78426 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX6-1P78426 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.27■□□□□ 0.04
NKX6-1P78426 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX6-1P78426 COX5BP2-201ENST00000392354 334 ntBASIC15.27■□□□□ 0.04
NKX6-1P78426 YBX2P1-201ENST00000394192 760 ntBASIC15.27■□□□□ 0.04
NKX6-1P78426 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NKX6-1P78426 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NKX6-1P78426 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.27■□□□□ 0.04
NKX6-1P78426 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NKX6-1P78426 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.27■□□□□ 0.04
NKX6-1P78426 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.27■□□□□ 0.04
NKX6-1P78426 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.27■□□□□ 0.04
NKX6-1P78426 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.27■□□□□ 0.04
NKX6-1P78426 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms