Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.4■□□□□ 0.22
GABREP78334 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GABREP78334 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.4■□□□□ 0.22
GABREP78334 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
GABREP78334 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GABREP78334 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GABREP78334 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GABREP78334 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
GABREP78334 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.4■□□□□ 0.22
GABREP78334 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GABREP78334 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GABREP78334 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GABREP78334 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GABREP78334 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GABREP78334 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
GABREP78334 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.4■□□□□ 0.22
GABREP78334 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.4■□□□□ 0.22
GABREP78334 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.4■□□□□ 0.22
GABREP78334 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.4■□□□□ 0.22
GABREP78334 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GABREP78334 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.4■□□□□ 0.22
GABREP78334 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GABREP78334 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.4■□□□□ 0.22
GABREP78334 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GABREP78334 Z92544.3-201ENST00000624747 417 ntBASIC16.4■□□□□ 0.22
GABREP78334 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GABREP78334 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.4■□□□□ 0.22
GABREP78334 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GABREP78334 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.4■□□□□ 0.22
GABREP78334 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.4■□□□□ 0.22
GABREP78334 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.4■□□□□ 0.22
GABREP78334 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.4■□□□□ 0.22
GABREP78334 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
GABREP78334 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
GABREP78334 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
GABREP78334 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GABREP78334 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.39■□□□□ 0.21
GABREP78334 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GABREP78334 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GABREP78334 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
GABREP78334 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
GABREP78334 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.39■□□□□ 0.21
GABREP78334 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
GABREP78334 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GABREP78334 BICD1-207ENST00000551848 1962 ntBASIC16.39■□□□□ 0.21
GABREP78334 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
GABREP78334 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
GABREP78334 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
GABREP78334 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.39■□□□□ 0.21
GABREP78334 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.39■□□□□ 0.21
GABREP78334 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.39■□□□□ 0.21
GABREP78334 ADH5P3-201ENST00000433842 1137 ntBASIC16.39■□□□□ 0.21
GABREP78334 AC005237.2-201ENST00000434368 219 ntBASIC16.39■□□□□ 0.21
GABREP78334 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.39■□□□□ 0.21
GABREP78334 DUX4L27-201ENST00000554796 1261 ntBASIC16.39■□□□□ 0.21
GABREP78334 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.39■□□□□ 0.21
GABREP78334 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.39■□□□□ 0.21
GABREP78334 AC026120.1-201ENST00000611536 926 ntBASIC16.39■□□□□ 0.21
GABREP78334 ACTL9-202ENST00000612068 1252 ntBASIC16.39■□□□□ 0.21
GABREP78334 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.39■□□□□ 0.21
GABREP78334 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GABREP78334 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GABREP78334 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GABREP78334 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
GABREP78334 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
GABREP78334 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GABREP78334 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GABREP78334 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GABREP78334 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.39■□□□□ 0.21
GABREP78334 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.39■□□□□ 0.21
GABREP78334 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GABREP78334 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
GABREP78334 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.38■□□□□ 0.21
GABREP78334 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.38■□□□□ 0.21
GABREP78334 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
GABREP78334 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.38■□□□□ 0.21
GABREP78334 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GABREP78334 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
GABREP78334 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GABREP78334 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
GABREP78334 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
GABREP78334 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GABREP78334 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GABREP78334 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GABREP78334 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GABREP78334 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GABREP78334 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.38■□□□□ 0.21
GABREP78334 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
GABREP78334 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.38■□□□□ 0.21
GABREP78334 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.38■□□□□ 0.21
GABREP78334 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.38■□□□□ 0.21
GABREP78334 SPDYE11-202ENST00000450699 704 ntBASIC16.38■□□□□ 0.21
GABREP78334 INGX-202ENST00000489074 768 ntBASIC16.38■□□□□ 0.21
GABREP78334 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.38■□□□□ 0.21
GABREP78334 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.38■□□□□ 0.21
GABREP78334 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.38■□□□□ 0.21
GABREP78334 SPDYE9P-201ENST00000570642 692 ntBASIC16.38■□□□□ 0.21
GABREP78334 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.38■□□□□ 0.21
GABREP78334 AC015911.4-201ENST00000588022 1070 ntBASIC16.38■□□□□ 0.21
GABREP78334 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms